Oncorhynchus tshawytscha (Chinook salmon): 112217471
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Entry
112217471 CDS
T05605
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112217471
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112217471
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
Actino_peptide
HTH_SB
HTH_29
Motif
Other DBs
NCBI-GeneID:
112217471
NCBI-ProteinID:
XP_024233538
UniProt:
A0A8C8FJS6
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Position
LG18:complement(10425168..10430512)
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AA seq
352 aa
AA seq
DB search
MDHTYGEVNQLGGVFVNGRPLPNSIRIRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKSIRDYKQGDPGIFAWEIRDRLLADAVCDKYNVPSV
SSISRILRNKIGNLSQPGQYENSKPIHPQLSYNHMYPYSYPSAMSPTGTKIGSGPGIPVT
PGHVSLSRHGWPSVHTVSNILGIRAFMDPAAIAGAEGYPSKMEEWASVNRATFSSAHGVN
GIEKSSLEADIKFPQSSSNLSSYACAYSPPNQYGVYGGPAGNYMTTGHHWQSQSTSLAHP
NSEAMMQGGDLHMAMSFKHSAREGDRKPPGPLSKHQHEALSVHGLSLPTSAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggatcatacatatggagaagtaaaccagcttggcggggtatttgtcaacggacgacca
cttccaaattcgattcggatcagaatcgtggaattagctcaacttggaatacgaccgtgt
gacatcagtagacagcttcgagtctctcatggctgtgtgagcaagatactagcgagatac
aacgaaacgggttcgatactgcccggtgccataggaggaagtaaaccccgggtcacaaca
cccaacgtggtgaaaagcataagggattacaaacaaggagaccctggaatatttgcttgg
gagatcagggacaggcttcttgcagatgcagtgtgtgataagtataacgttccctccgtc
agctccataagccgtattttacgcaacaaaataggaaatctttcccagccgggccagtat
gagaacagcaagccaatccatcctcagctctcctacaaccacatgtacccgtactcatac
cccagcgcaatgtcgcccactgggacaaaaattggcagcggtcccggtataccggtcacg
ccgggccatgtcagcctctcccgccatggttggccttccgtgcacacagtcagcaacatt
ttgggcatccgagccttcatggaccctgcagccatcgctggagctgaggggtacccatca
aaaatggaggagtgggcgagcgtaaacagagcgacgttttcctcagcccatggtgtcaac
ggaatagagaaatcctccctagaggcagacatcaagtttcctcagtcttcttcaaaccta
tctagttatgcttgtgcctactctcccccaaaccaatacggggtgtatggtggaccagca
ggtaactatatgacaacgggacaccactggcagtctcaaagcacaagtcttgcccacccc
aacagcgaagcaatgatgcaaggtggagacctccacatggcgatgtccttcaaacactca
gcacgagaaggagacagaaaacctcccggtcccttgagcaagcaccagcacgaggcgttg
agcgtacacggactatctctcccgacctccgcttcataa
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