Oncorhynchus tshawytscha (Chinook salmon): 112217486
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Entry
112217486 CDS
T05605
Symbol
myo6a
Name
(RefSeq) unconventional myosin-VI
KO
K10358
myosin VI
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112217486 (myo6a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112217486 (myo6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112217486 (myo6a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112217486 (myo6a)
04147 Exosome [BR:
otw04147
]
112217486 (myo6a)
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Myosins
112217486 (myo6a)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112217486 (myo6a)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112217486 (myo6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
MYO6_lever
Myosin-VI_CBD
Myosin_N
IQ
Mce4_CUP1
DUF948
Motif
Other DBs
NCBI-GeneID:
112217486
NCBI-ProteinID:
XP_042156581
LinkDB
All DBs
Position
LG18:11043745..11130426
Genome browser
AA seq
1302 aa
AA seq
DB search
MEDGKPVWAPHPADGFQLGTIVDIGANSLTIEPLKQGQKSFTAQINQVFPAEDDVNKHVE
DNCSLMYLNEATLLNNIRVRYSKDKIYTFVANILIAVNPYVDLPKLYAPETIKQYHGRSL
GTLPPHVYAIADKAYRDMRVLKMSQSIIVSGESGAGKTENTKFVLRYLTMSYGTGQDIDE
RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKNTVVGGFVSHYLLEKSRICQQSQ
EERNYHIFYRLCAGASEDIRTKFHLESPDAFRYLNRGCTRFFANKDTDKQILQNRKSPEH
LKAGPLKDPLLDDQGDFNRMCGAMKKIGLDDTEKLDLFRVVAGVLHLGNIDFEEAGSTSG
GCTIKNQSSQTVEYCAELLGLEESDLRVSLTSRVMLTTAGGAKGTVIKVPLKVEQANNAR
DALAKAVYSRLFDHVVTRVNQCFPFDSSANFIGVLDIAGFEYFEHNSFEQFCINYCNEKL
QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLVEAKLVGILDILDEENRLPQPSD
QHFAETVHNKHKNHFRLTVPRKSKLQVHRNVRDDEGFIVRHFAGAVCYETTKFVEKNNDA
LHMSLECLVSESKDRFIRDLFENSINAKDSKQKAGKLSFISVGNKFKTQLNILLEKLRST
GSSFIRCIKPNLKMVSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRAPFHELYNMYKQY
MPAKLTRLDPRLFCKALFKALGLNENDYKFGLTRVFFRPGKFKEFDQIMKSDPDHLAELV
KKVNQWLICSRWKKVQWCSLLRNKMMYRASACIKMQKTVRMWLCRRKHKPRIDGLVKVRN
LKNRMDKFNKVIAGLKEGKQEMSKQIHELDAAINATMVKIKTTVMTRMDIDHEYQALVTR
SEQLLTAMQNKKKQEEEKERLKKIQEEMEREKNRREEEEQRRKQEGDDRRLKAEMELKRK
HEEEERKKREEEERKLQAEMDVQLEAEREEEAVRQNILEQERRDRELAMRIAQSEAELIP
EESQNDAGLRSNGTSGFPSSPESATGAGGSQKLKGMSMEEMAKEMSELLSRGPQVQATKA
AAAAGTKKYELSKWKYAELRDAINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRGNDT
GNTEQRAPKSVTDYDLAPHVRQAPQANPAPPIPARQHEVAMNRQQRYFRIPFIRPGDQYK
DPQNKKKGWWYAHFDGPWIARQMELHPDKQPILLVAGKDDMEMCELSLEETGLTRKRGAE
ILPRQFEEIWERCGGIQYLRSAIESRQARPTYATAMLQSLLK
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgggaagccggtgtgggcgccccatccagcagatgggttccagctggggacc
atagtggacataggagccaacagcttgaccatcgagccgctgaaacaggggcaaaagagc
tttacagcccagatcaaccaagtgttcccagctgaggatgatgtcaacaaacatgtggaa
gacaactgttctttgatgtacttgaatgaagccactctactgaacaacatccgcgtgcgg
tacagtaaagacaaaatttatacgtttgtagccaatatcctgattgcagtgaacccgtat
gttgacctcccaaagctctacgctccagagaccattaaacagtaccatgggaggtccctg
ggcaccctgccgccccacgtctacgctatcgctgacaaggcctatagggacatgagggtg
ctgaagatgagccagtccatcatcgtgtctggggaatctggtgccggaaagactgaaaac
accaagtttgtccttcgatacttaacaatgtcctatggaacaggtcaagatattgatgag
agaatagttgaagccaatcccctgctggaggcttttgggaatgctaaaactgtcaggaat
aataacagtagtcgctttgggaagtttgtagagatccacttcaacgaaaagaatactgtg
gtgggaggctttgtgtcccactacctgctggagaagtccaggatctgccagcagagccag
gaagagaggaactatcacatcttctaccggctgtgtgccggagcctcagaggacatcagg
accaagttccatctggaatccccagatgccttcaggtatttgaacagaggatgcactcgc
ttctttgcaaacaaggacacagacaaacagatccttcagaaccgcaagagcccagagcac
ctgaaagctgggcccctgaaggaccctctgctggacgaccagggggacttcaacaggatg
tgcggggccatgaagaagatcggcctggatgacacggaaaagctggacctgttcagagtg
gtggccggggttttgcacttaggcaacattgactttgaggaggcagggagcacatcaggt
ggctgcaccataaagaaccagtcgagccagactgtggagtactgtgctgagctgctgggt
ctggaagagtcggacctgcgagtcagcctcacctccagggtcatgctcaccacagcaggg
ggcgccaaaggaacagttatcaaggtgccattgaaagtggagcaggcaaacaacgcgcgg
gacgccctggccaaggctgtgtacagccggctgtttgaccacgtggtcaccagggtcaac
cagtgcttccccttcgactcctccgccaacttcatcggggttctggatatcgcaggcttc
gagtactttgagcacaacagctttgagcagttctgcatcaactactgtaacgagaagctg
cagcagttcttcaacgaacgcatcctgaaagaggaacaagagctgtatcagaaggagggt
cttggagtaaatgaggtccattatgtcgacaatcaggactgcatagaccttgtggaggcc
aagctggtgggcatcttggacatcctggatgaagagaatcgtctacctcagccaagcgac
cagcactttgcagagaccgtacacaacaagcacaagaaccacttccgactaaccgtgccc
aggaaatccaagctgcaagtccacaggaacgtgagggatgacgagggattcattgtcaga
cactttgcaggagcggtgtgctatgagacaaccaagtttgtggagaagaacaatgatgcg
ctgcacatgtccctggagtgcctggtgagtgagtctaaagaccggttcatccgggatctc
tttgagaattccatcaatgccaaggactctaaacagaaggcaggcaaactcagcttcatc
agcgtcggcaacaaattcaagacccagctgaacattctactggagaagcttcgcagcacg
ggctccagtttcatccgctgtatcaagcccaatctgaagatggttagccaccagtttgaa
ggggcccagatcctctcccagctgcagtgctcaggaatggtgtctgtgctagatctcatg
cagggaggcttcccctccagagcgccattccatgagctctacaacatgtacaagcagtac
atgcctgccaagctgactcgcctggacccaagactcttctgcaaggctttattcaaagcc
ctgggtctgaacgagaacgactacaagtttgggctgaccagagtgttcttcagacctggg
aagtttaaggagtttgatcagatcatgaagtctgaccctgaccacctggcagagctggtc
aagaaggtcaaccagtggctcatctgcagccgctggaagaaggtccagtggtgttccctc
ttgaggaataagatgatgtaccgcgccagtgcctgcatcaagatgcagaagacggtgcgc
atgtggctgtgcaggaggaagcacaagccccggatcgatgggctggtgaaggttcgtaac
ctgaagaacaggatggataagttcaacaaggttatcgccggcctgaaggaggggaagcag
gagatgagcaagcagatccatgagctggatgccgccatcaatgcaaccatggtcaaaatc
aagactacagtcatgacccgcatggacatcgatcacgagtaccaggccctggtgacccgg
tcagagcaactgctgaccgccatgcagaacaagaagaagcaggaggaggagaaggagcga
ctgaagaagatccaggaagagatggagagagagaagaataggagggaggaggaggagcag
cgccgcaagcaggaaggagacgacaggcgcctgaaagcagagatggagctgaagagaaaa
catgaggaagaggagcggaagaagagggaagaagaggagaggaagcttcaggcggagatg
gatgttcagctggaggctgagcgagaggaggaggcggtgcgccagaacatcttggagcag
gagagacgcgacagggagctggccatgaggatcgcccagagcgaggctgaactcatccca
gaggagagccagaacgacgcaggcctgcgcagtaacggcacctcaggttttccatcatcc
ccagagagcgctactggagctggtggatctcaaaagctcaagggcatgtccatggaggaa
atggccaaggaaatgtctgagcttctgtctagaggcccacaggttcaggccaccaaagct
gctgctgctgctggcaccaagaagtacgagctcagcaagtggaagtatgccgaactgagg
gacgccattaacacatcctgtgatattgagttgctggctgcctgccgagaggagttccac
cgccggctgaaggtctatcacgcctggaagtcaaagaacaagaagcgtggcaacgacacc
ggcaacactgagcagagggcccccaaatcagtcaccgactacgatctcgcacctcatgtg
agacaagcaccccaggcgaacccagccccgcccatcccagccaggcagcatgaggtggcc
atgaacaggcagcagcgctacttccgcatccccttcatcaggcccggggaccagtacaag
gacccccagaacaagaagaagggctggtggtatgcccactttgacgggccctggatcgcc
aggcagatggagctgcatccggacaagcaacccattctgctggtggcagggaaagatgac
atggagatgtgtgaactgagcctggaggaaacaggcctgacaaggaagaggggagctgag
atactgccccggcagtttgaggagatctgggagcgctgcgggggcatccagtacctccgg
agcgctatcgagagccgacaggcccgccccacctatgccacagccatgctgcagagcctc
ctcaagtaa
DBGET
integrated database retrieval system
