Oncorhynchus tshawytscha (Chinook salmon): 112217497
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Entry
112217497 CDS
T05605
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112217497 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112217497 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112217497 (rars2)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112217497 (rars2)
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
112217497 (rars2)
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class I (G)
112217497 (rars2)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112217497 (rars2)
Prokaryotic type
Other AARSs
112217497 (rars2)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112217497 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
112217497
NCBI-ProteinID:
XP_042156583
LinkDB
All DBs
Position
LG18:complement(11628633..11641788)
Genome browser
AA seq
614 aa
AA seq
DB search
MHMACYFRRSIASKLSRALGRSEDAFISALCAIPVSKKQQSPDFRLSVNTLLRNGILPTN
GDLQAQTEALASQLKQDSVVEEIFAGRGVIHFRVSRNLLVQKVLEQLCQERHKFGVKSEL
FDGLKKGTTVVEFSSPNIAKKFHAGHLRSTIIGNFIANLKESLGNNVIRVNYLGDWGMQF
GLLGAGFQLFGCQEKLKKNPLQHLFDVYVQVNKEAENNEVIGQAAREFFRRLEQQEHQAL
LLWKQFREITVEEYQQVYKRLGVHFDIYSGESFHQQQAQEVVQQLQRRGLLKTTEKGTGV
VDLSSAGDMSSYSTVLRSDGTSLYITRDLAAAIDRKERYNFDEMIYVTDKSQGIHFQQLF
QILLAMGHSWAERCQHVPFGLVQGMKTRLGEVVFLEDVLDEARARMLRNMSQSKTTKEMV
YPEDTAEKVGISALIVQVNKFDPTLKNMTYQPNILFFKLTYLLYETKDKQMDFKGPLGSD
YKFDWDRILQAQGDTGVFLQYTHARLCSLIHRYGDREEGAFDPSLLLDQRSISILQHLLR
YDEVLYQSVQDLQPKHLVNFLMTLSHLAASAHRELPVKGSPQAVAQARLRLFSGVCTVLA
NGMKILGITPVEKM
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggcttgttatttcagaagaagtattgcatcgaagctctctagggctttggga
cggtctgaagatgccttcatttcagctctctgtgctatcccagtctccaaaaaacagcaa
tccccagatttccggctgtctgtcaacactctgctgaggaatgggatcctgccaactaat
ggagacctccaggcacagacagaggctctggccagtcagttaaagcaagacagtgtggtg
gaagaaatatttgctggacggggagtgatacactttagagttagtcggaatctgttagta
cagaaagttttagagcagttgtgccaagaacgtcacaaatttggtgtgaaaagtgaactt
ttcgatggcctcaaaaaaggaacaactgtggtggagtttagttccccaaatattgccaag
aaatttcacgctggacatctgcgttccaccattattggtaacttcattgccaacctgaaa
gaatccttgggaaataatgtcattagagtgaattacctaggagattggggcatgcagttt
ggtttgctgggagctggctttcagctctttgggtgtcaggagaaattgaaaaagaatccc
ttacaacacctatttgatgtttacgttcaggtgaacaaggaggcggagaacaatgaggtc
ataggacaggcggccagagagttctttagacggctggaacagcaggaacaccaggccttg
ttactatggaaacagtttagagagatcacagtggaggagtaccaacaagtctataagcgc
ttaggggttcactttgacatctactctggagagtcttttcaccaacaacaagcccaggag
gtggtgcagcagctacagagacgaggcctgctgaaaaccacagagaaggggacaggcgtg
gtggatctctcttcagctggagacatgtccagctactccacagtactacgcagtgatggg
acatctctctatatcaccagagatcttgctgcagccatagatcgaaaggaaaggtacaat
ttcgacgagatgatctatgtgacagacaaaagtcaagggattcatttccagcagctgttc
cagatcctcttggctatgggacactcgtgggctgagaggtgccagcatgtgccgtttggc
ctggtgcagggtatgaagacgaggctaggagaggtggttttcctggaagacgtcctggat
gaagcccgggctaggatgctcaggaacatgagccagtctaagaccaccaaggaaatggtg
tatccagaagacacagctgagaaagtggggatcagcgcactcatagttcaggtgaacaaa
tttgacccaaccttaaagaatatgacataccaaccaaacatcctattcttcaaacttacc
tacctgctgtatgaaacgaaggacaaacaaatggactttaaagggcctctaggatcagac
tacaagtttgactgggacaggatcctccaggcccaaggtgatacaggggtgtttctacag
tacacacatgccagactctgtagtttaatacatcgctatggcgacagagaggaaggtgcc
tttgacccgtcacttcttctagatcagaggagtatttcgatactccagcacctccttcgc
tatgacgaagttctataccagtctgtacaggatctgcagccaaaacatctcgtcaacttc
cttatgacactgagtcacctggctgcgtcagcacacagggagctgccagtgaagggaagc
cctcaagctgttgcacaggctaggctgcggctcttcagtggtgtctgcacggtgttggcc
aacgggatgaaaatattaggcatcacaccagtcgagaaaatgtga
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