Oncorhynchus tshawytscha (Chinook salmon): 112217552
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Entry
112217552 CDS
T05605
Name
(RefSeq) syntaxin-7
KO
K08488
syntaxin 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
otw04140
Autophagy - animal
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112217552
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112217552
04140 Autophagy - animal
112217552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112217552
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112217552
Membrane trafficking [BR:
otw04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
112217552
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112217552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Syntaxin
Vac_Fusion
DUF4191
TOP_N
RTT107_BRCT_6
Cep57_CLD_2
DUF3040
Helo_like_N
DASH_Dad4
Motif
Other DBs
NCBI-GeneID:
112217552
NCBI-ProteinID:
XP_024233674
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All DBs
Position
LG18:complement(14184776..14194418)
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AA seq
262 aa
AA seq
DB search
MAYQYGKVQDPNVLTQTIISNIQKITQQTSEIQRIVNQLGTPQDTTELRQQLQQKQQNVN
HLAKETDRCVKEFGSLPVTTEQRQRKIQKDRLINDFSNALANFQKAQRQAAQKEKEFVAR
VRAESRVSGGFPDDSFGGNGNPFESGGQAQVQSQSQEVAITEEDLQLIQERETSIRQLES
DITDINEIFKDLGMMVHEQGDMIDSIEAHVETADLHVQNATQQLAQAADYQRKSRKKICI
LIVVLVVLAVVVGLIIWASVKG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccagtatggaaaagtgcaggacccaaatgtgcttactcagacaataatctcc
aacatccagaagataacacaacaaacatctgaaattcagagaattgtgaatcagttggga
accccacaagacacaactgagctcagacagcagctccagcagaaacagcaaaatgtcaac
caccttgccaaagagacagaccgatgtgtgaaggaatttggctctttgcctgtcacaact
gaacagcgccagagaaagatccagaaagatcgccttatcaacgacttctccaatgcactg
gccaatttccaaaaggcacagaggcaggctgctcagaaagagaaggagtttgttgccaga
gtccgtgccgagtccagagtgtcgggtggttttcctgacgacagctttggaggaaatgga
aacccctttgaaagtggggggcaggcccaggtccagtctcagtcccaggaggtggccatc
actgaggaagacctgcagctcatccaggagagagagacttctatcagacagctagagtct
gatattacagatataaatgaaatatttaaggacttgggaatgatggtccatgagcagggt
gatatgatcgacagtatagaggcccatgtcgaaactgccgaccttcatgttcagaatgcc
acccagcagttagcacaggctgcagactatcagcgcaaatctagaaagaagatctgcatt
ctcattgtcgttctggtcgtacttgctgttgtcgttggtttaatcatctgggcatcagtt
aaaggatga
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