Oncorhynchus tshawytscha (Chinook salmon): 112217560
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Entry
112217560 CDS
T05605
Symbol
l3mbtl3
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 3 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112217560 (l3mbtl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112217560 (l3mbtl3)
03036 Chromosome and associated proteins [BR:
otw03036
]
112217560 (l3mbtl3)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
112217560 (l3mbtl3)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112217560 (l3mbtl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
Chromo_MORC2_6th
DUF4882
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
112217560
NCBI-ProteinID:
XP_024233684
UniProt:
A0A8C8J575
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Position
LG18:14698076..14737383
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AA seq
806 aa
AA seq
DB search
MDESKNATNAATNAATPDFDVYGAMDWKDGVGTLTGSELKFKVNEFGVLEVLTEEGEDES
VKKAHATITWAVPTAQEDSAAVAVKEIEEMQEGQWAQRGLVCVRCQRKGSPVDFISDGLH
CSERCLQQDQQDELKLKKEVSKSNGEVVGVSRKRSLQQYKMDTPEVLPEDDDEVYEEKDS
RKTTRGAPRGRRKRRGDAGLLRHTVPYGGKKKSWCWASYLEQDKAIAAPTKLFKEHQAFP
QSKNGFRVGMKLEGVDPEHPSMYCVLTVAEVSGHRIRLHFDKYSDYYDFWVNSNSADIHP
VGWCEKTGHTLHPPKGLKDEEFSWLSYIKLSKAQAAPKALFENQNATVTPLGFRIGMKLE
AIDKKNPSFICVATVTDMVDSRFLVHFDDWDESYDFWCDATSPYIHPVGWCQDNDRILTK
PPGYPNVKNFSWGKYLEETHSSPAPARAFKGKPPHSFQPLMKLETVDKRNPMLVRVATVV
DTDDHRVQIHFDGWTDEYDYWVDTDSPDIHPAGWCAKTGHPLQPPISPQELFESSEQGGC
PTPGCKGVGHIKGARYSGHHSAVGCPYSDININKDSVLPDRLSGEMPGSGGLGRPRRAEP
NPDINPAPAPTADKHLSANPNHLDKPGRGEKAGIGVASAMERSIKKPAGTEPKRRVGRPC
KPRKVEEPVEEEMESEVSCIMETKVELTLQQALHQSVFMPCTSPSPSSSPFCWDQHSKLL
PTVAGITSSKVASWTVEEVIEFIQGLPGCREHVHTFRDEQIDGEAFLLLTQVDLVRIMSI
KLGPAIKIYNSILMFKTAEESACNEL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctaaaaatgctacaaatgcagctacaaatgcagcaacgcctgattttgat
gtgtatggtgccatggactggaaagatggtgttggaaccctaactgggagtgagctgaag
tttaaggtgaatgagtttggagtcttggaggtcctaacagaggagggagaagatgagagt
gtgaagaaagctcatgccaccattacatgggcagtgcccactgctcaggaggacagtgct
gcggtagccgtgaaagagatagaggagatgcaggaggggcagtgggcccagagaggcctg
gtgtgcgtgcgctgccaaaggaagggctcccccgtggacttcatttctgatggcctccac
tgcagtgagcgctgtctgcagcaggaccagcaggatgagctgaagctaaagaaggaggtt
tcgaagagtaatggggaggtggtaggggtcagccgtaagaggtctttgcagcagtacaag
atggacaccccagaggtcctgcctgaggacgatgatgaagtctatgaggagaaagacagc
aggaagacgacccgtggcgcaccgcgaggcaggaggaaacggaggggggatgcaggccta
ctaagacacactgttccatatggagggaaaaagaagtcttggtgttgggcctcatatctg
gagcaggacaaagccattgctgcccccactaaactgttcaaagagcaccaggccttcccc
cagagtaagaatggattccgggtgggaatgaagctagagggagtggatccagagcacccc
tccatgtactgtgtgctcactgtagctgaggtttcaggacacagaatacggcttcacttt
gacaagtactccgactactatgacttctgggtgaattccaactctgcagacattcaccct
gtgggatggtgtgagaaaacaggacacacgcttcacccccccaaaggtttaaaggatgag
gagttcagctggttgtcgtatatcaagctgagcaaagcccaggcagctcccaaggccctg
tttgagaatcagaacgcgactgtcactcctttaggattcagaattggaatgaagctggag
gccattgacaagaagaacccctccttcatctgtgttgccacagtaacagacatggtggac
agtcgattcctggtgcactttgatgactgggatgagagctacgacttctggtgtgatgca
accagtccatacatccacccagtgggctggtgtcaagacaacgacaggattctcaccaag
cctccaggttaccccaatgtcaagaatttctcctggggaaagtatctggaggagacccac
tcgtcaccggctcctgccagggcttttaaagggaaacccccccacagtttccagccactc
atgaagttggagacggtggacaagaggaaccccatgcttgtcagagtggccaccgtggtg
gacactgatgaccacagggtccagatccattttgatggctggacggatgagtatgactac
tgggtggacacagacagtccagacatccaccctgcgggctggtgtgctaagacaggccac
cccctccagcccccgatcagtccacaggagctgtttgagtcgtctgagcagggcggatgt
cccaccccagggtgtaaaggtgtgggccacatcaaaggagcccgctactctggccaccac
agtgcggtgggatgcccatactctgacatcaacatcaacaaggactcagtgctgccagac
cgtctgagtggtgagatgccagggtcaggaggactggggcgaccccgacgggcagaaccc
aacccagatatcaacccagctccagctcccactgcagacaagcacttaagcgccaaccca
aatcacctggacaagcctggcaggggcgagaaggctggcatcggggtggcaagtgccatg
gagcggtcaatcaagaaacccgccggcacagagccaaaaaggagggttgggcggccatgc
aaaccgaggaaggtcgaggagccggtggaggaggaaatggagagtgaggtgtcatgcata
atggaaaccaaagtagagctgacactacagcaagcccttcaccagtcagtgttcatgcca
tgcacctcgccatcccctagcagctctcctttctgctgggaccagcacagcaagctactt
cccactgtggctggcatcacttcaagcaaagtggcttcatggacagtggaggaggtgatt
gagttcatccaaggtcttccaggctgtagggaacacgtgcacactttcagagacgagcaa
atagatggcgaagccttcttgctgttgacccaggttgacttggtgaggatcatgagcatc
aagctgggtccagccattaagatctacaactccatcttgatgttcaagacggcggaggaa
tcggcatgtaatgagctctga
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