Oncorhynchus tshawytscha (Chinook salmon): 112217567
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Entry
112217567 CDS
T05605
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112217567 (med23)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112217567 (med23)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
112217567
NCBI-ProteinID:
XP_024233712
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All DBs
Position
LG18:complement(14995097..15023324)
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AA seq
1386 aa
AA seq
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MAISMETQLQSIFEDVVKTEVIEEAFAGMFMDTPEDERTKLISCLGAFRQYWSTLPPDSH
DQCVQWIVRFIHGQHSPKRISFLYDCLAMAVETSLLPPRMVCQALISSDNLEWERTQLWA
LTFRLIRKIIGGVDYKGVRDLLKALLDKIQTIPNTVSSAVVQQLLAAREVVEYILDRNAC
LLPAYFAITEIRKLYPEGMLSHWLLGSLMSDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLRGMLPFDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDISKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLGMT
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRITLPGTNCTASGSVTPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGT
WCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSM
TNENDIITHFSMQGSPPLFLCLLWKMLLETDKINQIGFRYTTKVLERIGARALVAHVRTF
ADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFII
QLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNPPMQ
QQSHYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLY
NTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRAPGWCLSETYIKCGMNPREDNVWIPDDT
YYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNAL
LSVVLKSQPLVPRENITAWMNAIGLVITALPEPYWVVLQDRIVSVLGSPCFTTETEWVGY
PFALLDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPIVKTEFQLL
YVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHSQHLSYMDPICDFLYHIKYMFT
GDSVKDQVEKIILTLRPAMKLRLRFITHTSKMEPAATSVPQPSSSVSSPAPQSNPGPSNL
PLSGAQ
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcaatggaaacccagctccagagtatattcgaggatgtagtgaaaacagaa
gttattgaggaagcctttgcaggcatgtttatggacacacctgaggatgagagaacaaaa
cttatcagttgtctaggtgcctttcgtcagtattggagcactcttcctccggattcccat
gaccagtgtgtgcagtggattgtccgattcattcatggccagcacagccccaaacggatc
tcttttctctacgactgcctcgccatggcagtggaaaccagtctgttacctcccaggatg
gtgtgtcaggctctcataagctcagataacctggagtgggagcggacacagttatgggcc
ttgacttttcgactcatacgaaagatcatcggtggtgtggattacaagggagttagagat
ctactgaaggctctgctggataagattcagaccatccccaacactgttagctcagctgtg
gtccagcagctgctagctgcacgagaggtggtggagtacatcctcgacaggaacgcgtgc
ctcctgcctgcctactttgccattacagagatcagaaaactctatcccgaggggatgttg
tcacactggcttctgggcagtctcatgtcagattttgttgacagttttcgacccactgca
agaattaactccatctgtgggagatgcagcctccttccagtggtcaacaactctggagct
atctgcaactcctggaagctggaccccaccacattacgattccctctcaggggcatgctg
cccttcgacaaggacctgtttgaaccacagacagggctgctgcgatatgtgctggagcag
ccctactctcgagacatggtctgcaacatgttagggctcaacaagcagaccttgaacatt
gctcagcacaagcagcgctgcccggtgctcgaggaccagctggtggacctggtggtgtac
gccatggagcgctcggagaccgaggagcaatttgacgacggcggcaccagccagctcctg
tggcagcacctctccagccagctcattttctttgtgctcttccagttcgccagcttccca
cacatggtgctctcgcttcaccagaagctggccggtcgaggtctgatcaaaggccgagac
cacctcatgtgggtcctcctccagttcatatctggcagcattcagaagaacgccctggct
gactttctccctgtcatgaagctgttcgatcttctctacccagagaaagagtgcatcccg
gtgccagacatcagcaagccccagtcgacccacgccttcgccatgacttgcatctggatc
cacttgaaccgcaaggctcagaacgacaactccaagctgcagattcctattccccactcc
ctcaagctgcaccatgagtttctccagcagagcctgaggaacaagtccctggggatgaca
gactataagatcgccttgctgtgtaatgcctactccactaactctgagtgcttcactctg
cccatgggcgtgcttgtggagactatctatggcaacggcagcatgcgcatcaccctgcct
ggcaccaactgtaccgcatcaggctccgtcacaccactacccatgaacctcctagactcc
ctcaccgtccacgccaagatgagcctgatccatagcatcgccactcgggtgatcaagttg
gcccacgccaagtccagcatcgccctggccccagccctggtggagacctacagcagactg
ctggtctacatggagatagaatctctgggcatcaaaggattcatcagccagctcctgccc
aatgtgttcaagtcccacgcctggggcatccttcacactctgctggagatgttcagctac
cgtatgcaccacatccagccccactaccgcgtccagctgctcagccacctgcactcgcta
gccgccgtgccccagaccaaccagaaccagctacacctctgtgttgagagcacagcgtta
aggttgatcacagcgttggggagttctgaggttcagcctcagttcacccgcttcctcagt
gaccccaaaacggtgctgtcagctgaatctgaggagctcaaccgtgccctcatcctgact
ctggccagagccacccacgtcacagatttcttcacgggctccgactccatccagggtacg
tggtgtaaggacatcctgcagaccatcatgaactttactcctcacaactgggcctctcac
accctgagctgtttccctgctcctcttcaggcgttcttcaagcagaacaacgttccccag
gagagccgcttcaacctgaagaagaacgtggaggaggaatacaggaagtggaagagcatg
accaacgagaacgacatcatcacccacttctccatgcagggatcgccgcccctcttcctg
tgtctgctgtggaagatgctgctggagactgacaaaatcaaccagatcggcttcaggtac
accacaaaggttctggagaggatcggggcgcgggcgctggtggcccatgtcaggacattt
gcagacttcctggtctatgagttctccacgtcggccggtggccagcagctcaacaagtgt
atcgagatcctcaacgacatggtgtggaagtacaacattgtcactctggacagactcatc
ctgtgcctggccatgaggagtcacgagggtaacgaggcccaggtctgctacttcattatt
cagctcctcctcctcaagcccaacgacttccgcaatcgcgtctctgacttcgtgaaggag
aacgcccccgagcactggctgcagagcgactggcacaccaagcacatgacctaccacaag
aaatacccggagaagctgtactttgagggattggccgagcaggtgaacccgcccatgcag
cagcagtcccactacctgcccatctactttggtaacgtctgcctgcgcttcctgcccgtc
tttgacatcgtcatccaccgcttcctggagctgctgcccgtctccaagtcactggagacc
ttactggaccacctaggaggactctacaagttccacgaccgcccggtgacctacctgtac
aacacgctccactactacgagcgtcacctgcgcgaccgcaccaacctgaagaggaagctg
gtgcacgccatcatgagctctctgaaggacaaccgggcgccaggctggtgcctgagtgag
acctacatcaagtgtggcatgaacccccgcgaagacaacgtctggatccccgatgacacc
tactactgcaagctcatcggacgcctcgttgacacgatggctggcaagtcccccgggccg
ttcccaaactgtgactggaggttcaacgagttccccaacccggccgcccacgctctccac
gtcacctgcgtggagctgatggccctggcagtgcccggcaaggacgtgggcaacgccctg
ctcagtgtcgtcctcaagagccaaccgctggtgcctcgggagaacatcaccgcctggatg
aacgccatcggcctggtgatcaccgccttgcctgagccttactgggtggtcctgcaggac
cgtatagtgagtgtgctgggcagtccgtgcttcaccacagagactgagtgggtgggttac
cccttcgcgctgctggacttcaccgcctgccaccagtcctactctgagatgtactgcagc
tacgtgttggccctggcccacgccgtgtggcaccactccagcatcggacagctctccctc
atccccaagttcctgtctgaggtgctgaagcccatagtaaagacagagttccagctcctc
tatgtgtaccacctagtggggcccttcctccagcgcttccaacaggagaggacccgctgc
atgctggagattggagtggcgttctatgagatgctacaggctgtggaccagcacagtcaa
cacctgtcctacatggatcctatctgtgactttctctaccacatcaagtacatgttcacc
ggggacagcgtcaaagaccaggtggagaaaatcatcctgaccctgcgtccggccatgaag
ctccgtctgcgtttcatcacccacactagcaagatggagcctgcagccaccagcgtcccc
cagccctcctcctctgtgtcctcacccgccccacagagcaaccctggcccctccaacctc
cccctgtctggggcccagtaa
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