Oncorhynchus tshawytscha (Chinook salmon): 112217584
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Entry
112217584 CDS
T05605
Symbol
tbc1d32
Name
(RefSeq) protein broad-minded isoform X1
KO
K28444
TBC1 domain family member 32
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112217584 (tbc1d32)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112217584 (tbc1d32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BROMI
BROMI_C
BROMI_N
RabGap-TBC_2
RabGAP-TBC
RD3
Motif
Other DBs
NCBI-GeneID:
112217584
NCBI-ProteinID:
XP_024233759
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All DBs
Position
LG18:15740072..15780792
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AA seq
1310 aa
AA seq
DB search
MSQFSAEAEAELQSLLRQLLKSIKDRISGAPSIECAEEILLHLEETDKNFHNYEFVKYLR
QYVESSLGAVIEEETESCARGEGYAVGSVQDTLVHAVTRKTRESGEYKQMMQTLKNTMMV
VVESLINKFEEDQLRKEEMHRESQHQQSNSHYTDNCSDSDSSFNQSYAFIKQEQLQVLAE
KLDPGRPKEVRWEALQALCCAPPSDVLSCESWSGLRRNLSAALADPDPDLSDKVLRFFAK
TFSCSPLNVTREIYTSLAKSLESDFLYHKLSLPTGSAGIDVNRQDITRLLKQMRLMNDFQ
KEVTTFWIRHPEKYMEEIIESTFSLLSINPEHGLETQGSEKALKPMHLIALLDIKATWFK
KWMHGYYSRTVVFRLLERKYKSLIVAALQQCIHYHDSCDPVRDETAEVIHSMEHQHIGTA
QRTLYTTKELEYMYFVHSLCVLGRLLMYTNGRKLFPVTVWNRKDPVSLTDLLVILISIMY
QHPKPPHSDSSHADTLSPTTLVMELLRTLSDRTECAVECLYQTPVIETLLAPIITLLKGK
QAKLNSPETTLIHIADTLARIATTERGLSLFLDERNIVSGEGEGISAAHVIVQFTQRLLA
KELPLLRNAETSYGVSGAFIFVCRQMYNTCEGLQVLRPYGLHECIAAAWKKTTSLSERVP
TPVPGAIPGTSSQELQNVVVWEETLLDNLLNFAATPKGLLLLQQTGAINECVTYMFSRFT
KKLQVSRCEKFGYGVMVTQVAATAPGVVALHSSGFVQALVVEIWSVLECGREDVRVVHPK
STPMDPIDRSCLKSFLSLVNLLSSPHAVWELLGQQPLPNKAEYNLREMPTSITDLIDRLI
AVNSDVKIHSLFNYEQSHTFGLRLLSVMCCNLDSLLLLESQYNISDMLLQCQKDNITDPS
SGEGDFIIDGLSVERNHILVRMSVIGGPSERRLPLRVLQKGTDPYPWPMFSSYPLPKYYI
LNLPKTTRCKQDCEISAFLSSTKNTERDGSWMDTCRRQYCKVMTTKSNIVSGNILADLLE
KAVSYLSALPSERFFPPADYIGQCGIVTSGSGIKTGSLSSVDQLGIRASLRYGRHLNLLR
DNSEQDLCLLMKHCQELLSQQRAKLTSELYTLQGAYPGHDWFASTVFLIMAGDMERALRL
LLHLSTLLTSAFLWPARLHGSVHLPMEIAQSSIHPVYSCTAHYVEMLLKTEVPLVFSAFR
MSGFTPSQMCVQWLGQCFWNYLDWSEICHYVSTCVVMGPDYQVYMCVALLKHLQQDILQH
TQTQDLQVFLKEEPIQGFRVSNYLEYMEGLERSYRTMVLTDMNNISQRVS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagttctcagctgaggctgaggctgaacttcagtctcttttgaggcaacttcta
aaaagcatcaaagacagaatctctggtgcaccatccattgaatgtgcagaggaaatcttg
cttcatctggaggagacagacaagaacttccataattatgaatttgttaagtacctgcgg
cagtatgtggaaagctctctgggagcagtcatcgaggaggagacagagagctgtgcccga
ggggagggatatgctgttgggtctgttcaggacaccttggtccatgctgttacaaggaag
actagagaatctggagaatacaagcaaatgatgcagacattgaagaacacgatgatggta
gtcgttgaatctttgattaataaatttgaagaggaccaactgagaaaggaggagatgcac
agggagagccaacatcagcagtcaaacagccattacacagacaactgctccgacagtgat
tcatccttcaatcagagttatgcatttatcaaacaagaacagctgcaagttcttgctgaa
aagcttgaccctggtaggcctaaagaggtgcgctgggaggccctgcaggctctgtgctgt
gccccgccctcggatgtgctaagctgtgagagttggagtggcctgcgcaggaacctctct
gctgccttggctgacccagaccctgacctcagtgataaggtcctgcgcttttttgcaaaa
acattctcctgttcgccactgaatgtaacaagggagatctacaccagtttagccaaaagt
ctggagtctgacttcctgtaccataaattgagcctccctactggatcagcggggattgat
gtaaacagacaggacattacccgtctcttaaaacaaatgcgattaatgaatgattttcag
aaggaagtaacaaccttttggattcggcacccagagaagtacatggaggagataatagag
agtactttctccctcctgtccataaaccctgaacacgggttagagacacaagggtcagag
aaagccttgaagcccatgcacctcattgccttactggatatcaaagccacctggtttaag
aagtggatgcatggttactacagcaggaccgtggtctttaggctcctggagaggaagtac
aagtctctgattgtggcagctcttcagcagtgcattcattatcatgactcctgtgaccca
gtcagagatgagacggctgaggtcatccactctatggagcaccagcacatcggcactgct
caaaggactctctacactaccaaggagctggaatatatgtatttcgttcactcattatgt
gtgcttggaaggcttctcatgtacactaatgggagaaagctctttcccgtcacagtgtgg
aaccgcaaagatccagtcagtctgacagacttgcttgtcattctgattagcatcatgtac
caacaccccaagcctcctcacagtgactcatcacatgcagacactctctctcccaccact
cttgtaatggagttgctgaggaccctgagtgaccgcacagagtgtgcagtagagtgcctt
taccaaacccctgtcatagagacactgctggcacccatcatcaccctgctcaaaggaaaa
caggctaaattaaactccccagaaactacattgattcatatagcagacactctcgcaaga
attgccaccactgagcgaggattatcacttttcttagatgaaagaaatatagtttctggt
gagggggaaggtatttcagctgcccatgtaatcgttcagttcacccagaggctcctggct
aaagagctgccattgttacggaatgcagagacatcatatggcgtaagcggggccttcatc
ttcgtgtgtcggcagatgtacaacacatgtgaaggactgcaggtgctcaggccctatggc
ctgcatgagtgcatcgctgcagcttggaaaaagacaacctccctgtcagaaagagttccc
accccggttcccggagcaatccccggcacgtcctctcaggagctgcagaatgtagtggtt
tgggaggagactttgctggacaacctgctgaacttcgctgccacaccgaaaggcctgctg
ctcctccagcagactggagccatcaatgagtgtgtcacctacatgttctccaggtttacc
aagaaactacaggtcagccgatgtgagaagtttggctacggtgtgatggtaacacaggta
gcagcaacagcccccggtgtggtggctttacacagttctggttttgtgcaggccttagtg
gtggagatatggtcggtcctggagtgtgggagagaggatgtgagggtcgttcaccccaag
tccacccccatggaccccattgacaggagctgtctgaagtcgttcctgtccttggtcaac
ctgctgtcctccccccatgctgtgtgggagctcctgggacagcagcctctgcccaacaag
gctgagtacaacctaagggagatgcccacatccattacagatttgattgataggctgatt
gctgtgaactcagatgtgaaaattcattcactgttcaactacgagcaatctcacacgttt
ggcctgagattacttagtgtgatgtgctgcaacctagactccctccttcttctggagtca
cagtacaacatttccgacatgttgctgcaatgtcagaaggacaacatcaccgatccatcg
tccggtgaaggagatttcatcattgatggtctatctgtggagaggaaccacatcctggtg
cgtatgagtgtgattggaggaccatcggagaggagacttccccttagggtcctccagaag
ggcactgacccttatccatggccgatgttttcatcataccctctgcccaagtattatata
ctgaatcttccaaagacaacccggtgtaaacaggactgtgagataagtgccttcctgtcc
tccaccaagaacacggagagggatgggagctggatggatacctgtaggagacagtactgc
aaagtcatgaccaccaagtccaacattgtctcagggaacatcctggctgatctactggag
aaggctgtgtcgtacctttctgctttgccatcagaacgtttcttcccacctgcggactac
ataggtcagtgtggcatagtgacgtcggggagcggcataaagactggcagcctgtcgtct
gtggaccagctggggattcgggcctctctcaggtatgggagacatctgaacttactgagg
gataactctgagcaggacctctgtcttttgatgaagcattgccaagagctcctatctcaa
cagagagccaaactcacgtcggagctttacactctgcagggagcctaccccggtcatgac
tggttcgcctccaccgtgttcctcatcatggctggagacatggagagagcactccgcctc
ctcctccacctctccaccctgctcacatcagccttcctctggcccgccaggctccacgga
tcggttcacctgcccatggagattgctcagtctagcatccatccggtctactcatgcaca
gcacactatgtcgagatgctgctgaagactgaagtgcctctagttttctctgcctttagg
atgtccggttttaccccctcccagatgtgtgtgcagtggctaggccagtgtttctggaac
tacctggactggtctgagatctgccactacgtgtccacctgtgtggtgatggggccggac
taccaggtgtacatgtgtgtggctttgctgaaacacctgcagcaggacatcctgcagcac
acacagacccaggacctgcaggtcttcctcaaggaggaacccatccaaggcttcagagtg
agtaattaccttgagtacatggagggtctggagcgcagttacagaacaatggtactgaca
gacatgaacaatatctcccagagagtcagctag
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