Oncorhynchus tshawytscha (Chinook salmon): 112217664
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Entry
112217664 CDS
T05605
Symbol
itgb7
Name
(RefSeq) integrin beta-7 isoform X1
KO
K06590
integrin beta 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04514
Cell adhesion molecules
otw04672
Intestinal immune network for IgA production
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112217664 (itgb7)
04514 Cell adhesion molecules
112217664 (itgb7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112217664 (itgb7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112217664 (itgb7)
04810 Regulation of actin cytoskeleton
112217664 (itgb7)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112217664 (itgb7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112217664 (itgb7)
04515 Cell adhesion molecules [BR:
otw04515
]
112217664 (itgb7)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112217664 (itgb7)
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin beta subunits
112217664 (itgb7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
112217664
NCBI-ProteinID:
XP_024233888
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Position
LG02:complement(32544292..32559791)
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AA seq
763 aa
AA seq
DB search
MVGIFMLGTFLLYCVGQNQIQGVPQGCVSQPSCSACLRSPGCAWCKHKDFLKSGESSERR
CDTAESLRTRRCEQMDIINPRLDPVFLKNNDLSSNSDNVVQLKPQNLLFKLRVGVPQTFN
VSFKRAEGYPIDLYYLMDLSFSMKDDLDTIKNLGQDILSALKKVTQKVRIGFGSFVDKVA
LPYVSQVKAKKNNPCPNRLNICQPAFSFQNILRLTEDVDEFKTRVSDQIISGNLDSPEAG
FDAIMQAAVCQSVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPHDGMCHLNGTGFYDG
TKYDYPSVGQLARVLAANNIQLIFAVTEDSVAAYKALSKLIPQSVVGVLKNDSSNVVLLI
SEAYSNLSSTILLEHHEAPSDLDVTYRSHCTPEKGDNTHWQRRGECMNVKLNQQVNFTVS
LNISTCLKEKQTFSLKLQGISETLKVSVETLCDCDCQDREEQSSHCNEIGTLTCGICSCD
EGHLGQRCECERPKDMTSAESMAATCRQDNSSQLCSGLGSCECGMCMCQGTHRGNFCQCD
DNICARHNNMLCGGNGQCECGTCKCNANYTGSACDCSTLTDQCRTVGKLCNGQGTCQCNQ
CQCNKDFFGINCSKIANACPKFLDCVTCELDNKKISGLKSNCSQLCGSVKLTWMKGPQEF
PCSKDTISYKVELLPDGNILIFYADLPRSIDKTYVIIGSSVSSIIFIGIAVILISRLMLE
LHYRREYDSFLKAKEAEVWQDMKNPLFQDATTVVVNPMHVQED
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttgggatctttatgttagggacctttctcttgtactgtgtgggacagaaccaaatt
caaggggtcccccaaggatgtgtgtcccagccctcatgttcagcttgcctgaggagccct
ggatgtgcctggtgcaaacacaaggacttcctgaagtctggagagtccagtgagcggagg
tgcgacactgctgagtctctgaggaccaggcgttgtgagcagatggacatcatcaacccc
cgattagatccagtctttctgaagaataatgatctcagcagcaactcagacaatgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagtcggagtccctcagaccttcaat
gtctcattcaagagagccgagggctaccccatagacctgtattacctgatggacctgtcc
ttctccatgaaggacgacctggacaccatcaagaacctaggccaggacatcctctctgca
ctgaaaaaagtcacccagaaggtccgcattggcttcggctcatttgtagacaaggtggct
ctgccatacgtcagccaggtgaaggccaagaagaataacccctgtcccaaccgcctgaac
atctgtcaacctgccttcagcttccaaaatattctgagactcacagaagacgtggacgag
ttcaagaccagggtcagcgaccagatcatctctggaaacctggactcccccgaggcaggc
tttgacgcaatcatgcaggcagctgtctgccagagtgtgattggttggaacaatgtcacc
cggatcctggtctacacgtcagatgacaccttccatattgccggggatggcaggctggct
ggtatattcgagcctcatgacggcatgtgccatctgaatggcactggcttctacgatggc
actaaatatgactacccatcggttggccagcttgccagggtcctggcagccaataacatc
cagctcatctttgctgtcaccgaggacagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtggtgggggtcctgaagaacgactccagcaacgtggtcctgctcatc
tcagaggcctacagtaacctgtcctccaccatcttactggagcaccatgaagctccctca
gatctggacgtgacctacagatcccactgcacccctgaaaaaggggacaacacccattgg
cagaggaggggcgagtgcatgaacgtcaagctcaaccagcaggtcaacttcacggtaagc
ctgaacatttcaacatgtctaaaggagaagcagacgttttccctaaaactgcagggcatc
agtgagaccctgaaggtctctgtggaaaccctgtgtgactgtgactgccaagacagagaa
gagcagtcctcacactgcaatgaaattggaacgctcacctgcggcatctgcagctgtgat
gagggtcacctgggtcagaggtgtgagtgtgagcggcctaaggacatgacctctgccgaa
tctatggccgcaacatgtcgccaagacaactcctcgcagctgtgcagcgggcttgggagc
tgtgagtgtggcatgtgtatgtgtcagggcacccaccgtggcaatttttgccaatgtgat
gacaacatctgtgcacgccacaacaacatgctctgcggtggtaatgggcagtgtgaatgt
ggaacatgtaagtgtaatgccaattacacaggctctgcatgtgactgttccaccctcacc
gaccagtgcaggactgttgggaagctgtgcaatggccagggaacatgccagtgtaaccag
tgccagtgcaacaaagacttctttggcataaactgctcaaagattgctaacgcatgccca
aaattcctggactgtgtgacatgtgaattggacaataaaaagattagcggcctaaagagt
aactgcagccaactctgtggctcagtcaagctcacttggatgaagggaccccaggagttc
ccctgcagtaaagacaccatctcctacaaagtggagctgttgcctgatggcaacatcctg
atcttctacgcagatctgcctcgctctattgacaagacttacgtgatcatcggcagctct
gtgtccagcatcatcttcatcggcatcgcagtgatcctcatcagcaggcttatgctagag
ctccactaccggagagagtatgacagcttcctcaaagcaaaggaggccgaagtctggcaa
gatatgaaaaatcccttgttccaggatgccacgaccgtggtcgtgaaccccatgcacgtt
caagaggactga
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