Oncorhynchus tshawytscha (Chinook salmon): 112217673
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Entry
112217673 CDS
T05605
Name
(RefSeq) protein SOGA3
KO
K27704
microtubule cross-linking factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112217673
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112217673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
APG6_N
TSC22
Halo_GVPC
Metal_resist
Motif
Other DBs
NCBI-GeneID:
112217673
NCBI-ProteinID:
XP_024233900
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Position
LG18:21502092..21507550
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AA seq
881 aa
AA seq
DB search
MDDTMNSAASGAADFPVAASDNSTARLHRAPSPTKSRECAPKPAQKSSSRSKNIVSKGGS
RNKVGNEGLRTAVVREKEIKKCDVEAFHSDGAETDAVNCNAKKADASREEGTEEIFHQPI
DSQTRRSSLRLSCLKGESSQHIGSYRPDGSSTAGSVKGKAKKRGGEAVTASAGCRRNRSG
EYVGCVPGLGLWSGGCLQTELIHFHLHKKLKRSGSKMHTKAERAPGAEASAETEPATEAI
EAEPVTQQDEGPEDELERLVDENEDLKTEIEEMRTEMDEMRDTFYEEDTCQLQEMRRELE
RANKNCRILQYRLRKAERKKLRYAQTGEIDEELLRSLEQDLKVAKDVSVRLHHELENVEE
KRTKTEDENEKLRQKLIEVEVTKQALQNELDKVKESQKRRGSKEVQRSDKKSAQTPTEDH
NEDLKCQLAFIKEEAVLMRKKTAKIDKEKDRLEAELQKYRSFYGDLDSPHPKGEAGGPPS
TRESELKLRLRLVEEEANILGRKIVELEVENRGLRAELDDLRGEGEGEGGSGGGAVGRVG
VGRGHGEAMTELRQQLQLVEDEAELLRRNLADAEDHNKRVMGELNKLRFKAGTHEGGARH
GGGVSGGGGLSTEKADALQEELKTARLQINDLSGKVMQLQYENRVLLSNMQRYDLASHLA
LRGCTSPRDSDADSDAGGTGPTVQRESDDDSSSSRILPPHRKREGPVGGESDSDEVRNQT
RCLTPTRGLYTPPPEVAARFLPRSPRDRQQMIDIRVEAERLGRTIDRLIADTATIIAEAR
VYVSNGDLYGRGSGGEEEDEGGRIREHELLYRINAQMKAFRKELQGFIDRLEVPKPEDRE
EEPLSIFQPIILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacgatgaactctgccgcaagcggcgctgcggattttccagtggcagcatca
gacaatagcacagcgaggctgcatcgggctccctcgccgaccaaaagccgggaatgcgcc
ccaaaaccggcccagaaatcctccagtagatccaaaaatatagtttccaaaggaggatcg
aggaataaggtgggaaacgaggggcttaggaccgctgtcgtgagggagaaggagatcaag
aaatgcgacgtggaagcttttcactcggatggtgctgaaaccgatgctgtcaattgcaat
gcaaagaaggcggatgctagcagagaggaaggtacggaggagatatttcaccagccgata
gattctcaaacccgtcgttcctcgttacgtttatcctgcctcaaaggcgagtcttcccaa
catattgggtcataccggccagacggctccagcacggcgggttcggtgaaagggaaagcg
aagaagcggggaggggaggcagtgaccgcatcagcaggctgccgcaggaatagaagcggg
gaatacgtgggctgcgtgccgggccttggtctgtggagcgggggttgcttgcagactgaa
ctcatccacttccacctacataagaaactgaagagaagcggcagtaagatgcacaccaag
gcagaaagggctccgggcgcggaggcctcggccgagacggaaccggctacagaggccata
gaggcggagcccgtgacacagcaagacgagggcccggaggacgagctggagagactggtg
gatgagaatgaagatctcaagacggagatcgaggagatgagaacggagatggacgagatg
cgtgacactttctacgaggaggacacgtgccagctgcaggaaatgaggcgtgaactggag
cgagccaataagaactgccggatcctccagtaccggctgaggaaggctgagaggaagaag
ctgcgctatgcccagacgggagagatcgacgaggaactactgaggagcctggagcaggac
ctgaaggtagcgaaggatgtgtctgtgaggctccaccatgagctggagaatgtggaggag
aaacgtacaaagacagaggacgagaatgagaaactgaggcagaaactcattgaggtggag
gtgaccaaacaggcccttcagaatgagctggacaaagtcaaagagtcacagaagagaaga
ggaagcaaggaggttcaacggtctgacaagaagtctgcccagaccccaacagaggaccac
aatgaggacctcaagtgccagctggctttcatcaaagaggaggctgtgttgatgagaaag
aagacagctaagatcgacaaggaaaaggaccgtctggaggcggagctacagaagtaccgc
tccttctacggggatctagacagcccccaccccaagggtgaggccgggggaccccccagc
acccgtgagtccgagctgaagctgcgtctgcgtctggtggaggaggaggctaacatccta
gggagaaagattgtggagctggaggtggagaaccggggactgagggccgagctggacgac
ctcaggggagaaggggagggagaaggggggtctggtggtggggctgtgggcagggtaggg
gtgggccggggccatggggaggccatgacagagctgaggcagcagctgcagctggtggag
gacgaggcagagttactgaggaggaacctggcagacgctgaggatcacaacaagagggtg
atgggagaactcaacaagctcaggtttaaggctggtacccacgagggaggagcgaggcat
ggaggaggggtgtcaggaggaggaggactaagcacagagaaggcagatgcactgcaggaa
gaactgaagacggcccggctacagattaatgatctcagtgggaaggtgatgcagctgcag
tatgagaaccgtgttctgctctccaacatgcagcgctacgacctggcctcccacctggcc
ctgagggggtgcacaagcccccgggacagcgatgcagacagtgacgcgggtgggaccggc
ccaaccgtacagcgcgagagtgatgatgactcctcctcctcccgcatcctgcccccgcac
cgcaaacgcgagggcccagtgggcggggaaagtgactcagatgaggtgcggaaccaaacc
cgctgcctcacacccacccgaggtctctacacaccgcccccagaggtcgctgcccgcttc
ctgcctcgcagcccacgggatcgccagcagatgatcgacatccgggtggaggcggagcgt
cttggcaggaccatcgaccggttaattgccgacacagcaaccatcatcgcagaggcgcgg
gtgtatgtttccaatggtgacctgtacgggcgaggcagcgggggtgaggaggaggatgaa
gggggtaggatcagggagcatgagctgctgtacaggatcaatgcccagatgaaggccttc
aggaaggagctacagggcttcatagacagactggaggtgcccaaacctgaggacagggag
gaggaaccactttcaatctttcagcccataattttactcatcctcatactagtcttattc
tcctccctctcctatgccaccatctttaaacttgtctttctgtttacccttttcttcgtc
ctgtga
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