Oncorhynchus tshawytscha (Chinook salmon): 112217677
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Entry
112217677 CDS
T05605
Name
(RefSeq) clathrin coat assembly protein AP180-like isoform X1
KO
K20043
clathrin coat assembly protein AP180
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112217677
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112217677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
ENTH
Motif
Other DBs
NCBI-GeneID:
112217677
NCBI-ProteinID:
XP_042156749
LinkDB
All DBs
Position
LG18:21255835..21303284
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AA seq
721 aa
AA seq
DB search
MSGQTLTDRIAAAQYQLTGSEVSRAVCKATTHEVMAPKKKHLEYLISATNATNVNIPQMA
DTLFERATNASWIVVFKALVTTHHMCVHGNERFIQYLASRTALFNLSNFIDKTGSNGYDM
STFIRRYGRYLNERAFAYRQMAFDFTKVKKGAEGVMRTMTPEKLLKGMPVLQTQIDTLLE
FDVHPKELNNPIINAGFLLLFKDLVKLFASYNDGVINLLEKYFKMKKSDCKEALEIYKRF
LTRVTKIGEFMKLAETVGVDKNDIPDINYAPSSILESLETHMNSLEGKKGEGSPTKGSPT
NNVSPTSTPAKSAAAVPTLAPPPEEATDSLLDLDPLSSSGPSVGASAAPTSWGDLLGSEM
GESMLPDPTLAVEPVPSPAGVTSTPAAAEPGVSLAPPPNAAAAPTPGATNMDLLGDAFST
PVLTSDATAEGGAPASTPTPAAEAAADPFAPSGGSSEAVGPGLDLFAMMPMENNCFNSGV
PPSAPSSTITAPITPTTPSIDLLSAMFDSMPDPSVTKADLAPSVDMFGADAFSSPALLSS
APPMDKGVIMDLFGDSTGGETKPAAPVSASGAELMAAFDGLGDVLMPSMTPQAGAASSPV
KPMGGDLDATMASMASNLGMGSQKPGENTMGGWSTPQVAPPSWGAPMNVPMGSPSFMGSN
QGFSMGGAVGAGAPMMPMVRPGFGAPATPGAPMGSPGMAGSPRRPPPPKNALDDLNIKDF
M
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagacgctcacggatcgtattgccgctgcgcagtaccagttgacgggatca
gaggtatctcgcgccgtctgcaaagccaccactcatgaggtgatggcgcccaagaaaaag
cacctggaatatctgatctcggccaccaatgcgaccaatgtgaacatccctcagatggct
gacactctgtttgagagggccaccaacgccagctggattgtcgtcttcaaggccctcgtc
accacacaccatatgtgtgtccatggcaatgagaggttcatccagtacttggcctccagg
accgctctgttcaacctcagcaactttatagacaaaacaggttccaacggctatgacatg
tctacgttcatcagacgttatggccgctacctcaatgagagggccttcgcctaccgccag
atggctttcgacttcaccaaagtcaaaaagggtgctgagggggtgatgaggacaatgact
ccagaaaagctgttgaaaggcatgcctgtcctgcagacccagatcgacacactgctggag
tttgatgtccatcccaaggagctgaataaccctatcatcaacgcagggttcctgctgctc
ttcaaggatctggtcaagctgtttgcctcctataacgatggggtcatcaatctattagag
aaatactttaagatgaagaagagcgactgcaaggaggccttggagatctataagaggttc
ctgaccagggtcaccaagatcggagagttcatgaagcttgctgagactgtcggagtggac
aaaaatgatattcctgacatcaactatgctcccagcagcatcctggagtctctggagaca
cacatgaacagtttggaggggaagaagggtgaagggtctccaacaaaggggtcccctacc
aataacgtgtccccgacctccacccccgccaaatctgcagccgccgtgcccaccctagcg
ccgccacctgaagaagccaccgattctctcttagatctggaccctctctcctcctctggt
ccgtcagtaggagcctcagcagcccctacgtcctggggagacctccttgggtcagaaatg
ggcgagtccatgcttcctgaccccaccttagctgtagaacccgtcccctctcccgctggt
gtaacgtccacccctgcagctgcggagccaggagtctctctggctcctccccctaatgcg
gccgctgcccccacccccggcgcgacgaatatggatctgctgggagatgcattttcgacc
cctgttctcacctctgatgccactgctgagggcggagctccggcctccacgccaacccca
gccgccgaagctgctgccgacccctttgccccctctggtggtagctcagaagcagtaggc
ccagggctggacctgtttgctatgatgcctatggagaacaactgctttaactcaggggtg
cccccttctgccccctcatccaccatcacagcacctatcacccccaccaccccatcgata
gacctcttgagtgctatgtttgattccatgccagatccaagcgtcaccaaagcagacctt
gcccccagtgttgacatgtttggagcagatgccttctcctcccctgccctcctctcctct
gctcccccaatggacaagggggtgatcatggacctgtttggggactccactggtggagag
accaagcctgctgcccctgtatctgcctctggtgctgagctgatggcagcgtttgatggt
ctaggggatgtgttgatgccttctatgacaccccaggccggggcagcctcgtctccagtc
aaacctatgggaggagacctggacgccaccatggctagcatggctagcaatctgggaatg
gggagccaaaaaccgggggagaacacgatgggaggctggtcaactcctcaggtagctcct
cccagttggggcgctcccatgaacgttccaatggggtccccttcttttatggggtctaac
caaggattcagcatgggcggagcggtcggggctggagctcccatgatgcccatggttagg
ccaggctttggagcccctgcaaccccaggagcaccgatgggatctccagggatggccggg
agtccgaggaggcctccgccccccaagaatgccctggatgacctcaacatcaaggacttc
atgtaa
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