Oncorhynchus tshawytscha (Chinook salmon): 112217704
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Entry
112217704 CDS
T05605
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112217704
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112217704
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
112217704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
ANAPC4_WD40
WD40
Lgl_C
Synaptobrevin
WD40_like
Motif
Other DBs
NCBI-GeneID:
112217704
NCBI-ProteinID:
XP_024233943
LinkDB
All DBs
Position
LG18:24437168..24577815
Genome browser
AA seq
1149 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSVSSGQSGAPENNLMHETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQRRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYEAGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQARSPRKARQPAGGNGLCDINEGSASEDRCKSPTSVLA
SNHQQFYNGGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSV
TSIDKEAREAITSFHFCETFARKGDSAITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPV
IVLPSGTLARLKGSILRMAFLDNTGTFLPPAFETWYEPNAAGADSEERDKARKRRPVSVS
PSTSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACF
CANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQET
CENLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGETQAGKASRGLAQHIP
GPQGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLK
CKDKKWYQF
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctaaaggagcaggcgtcttcctct
gtttcgtctggccagtcgggcgccccggagaacaatttgatgcacgagacccttcagtcc
gagaattttcagctctgcaagactgtccgtcatggcttcccttatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagcggggccctcagactg
tttggtcgtccaggtgtggagtgctactgtcaacatgagagtggagcagccgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagacgacagtgtgcac
ctctggaacctgaggcagaggaggcccgccatcctccactcgctcaagttcaacagagag
aggatcacattcgtccacctgcccttccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtcgttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagctcatcattggatatgaggctggaattgtggtcttgtgg
gatctgaaatctaagaaagcagactaccgctacacttacgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacatcaagggccagggcaagccatttcagacaatcaccccacatggaaagcagccc
aaggatggaaagaagccagagccctgcaaacccatcctcaaagtggagtacaagaccact
agactgggagaccccttcatgatcctgtctggaggtctgtcgtatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactatcct
atcgtagacttcctcacgctctgtgagacgccatactctaacgattttcaggaaccttat
gctgtagtggtccttctagaaaaggatttagttgtaatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccattcatgagtctccggttacctgctgtgag
tactttgctgactgccctgtggacctcatacccgcactttactctgttggctccagacag
aaacgacagggctacagcaaaaaggagtggccaatcagtggtggtaactggggcctcggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctccaggtactgtacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggacaagcagaacacagagattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtacgtctgcagtacgaggtgaatgacatggagtcccctccagaggggggaggg
gggggggaccgtgacctgcccaccccaggagcagcctcacctagcccccagaccaccgga
cccccgactcacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttggtg
gtgcagctggtgtgggtaagtggagagcccccccaacaaatcaccagcttggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatggtctggcggtggtggactacctc
caaaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccctac
cagagacaggctcgctctccacgcaaggcacgccagcccgccggaggtaatggtctgtgt
gacatcaacgagggttctgcctcggaagaccgctgcaaatcccccacttcagtgttggcg
tcaaaccatcagcaattctacaatggaggtgggggtagaggagcaaagatgtcacggaaa
ttaagcttgcctactgagctaaagccagacttggtcctcctgtctgtatgtcctccacgg
ggcgccaacccattagaccaccgggacaactccttcagccgttcgcgctcctcctccgtc
acgtccatcgacaaggaggcgcgcgaggccatcacatccttccacttctgtgagacattc
gcccggaagggggacagcgccatcacaccatgcctatacgtgggaacctccctgggaaca
gtgctggctgtggccctcaacctgccccctgctggggaacaaaggctgctgcagcccgtt
atcgtcttacctagcggtaccctggcacgactgaagggcagtatcctgaggatggccttc
ctggacaacacaggaacctttctcccccctgccttcgagacctggtatgagccaaacgct
gcgggcgctgacagtgaggagcgagacaaggcccgtaaacgccgcccggtctctgtgtcg
ccctccacctcccaggagctgcaggagagccagtatgcggtggtgtgctctgagaaacag
gctaaggtcatagcactgccctcacagaactgcatcttcaaacacagcatcacagagaca
tcgttcgtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgcttc
tgtgctaacggacacatcatgaccctcagtctgccggggctgagaccgttgctggatgta
aactacctgccactgacagacatgcggatagcccggactttctgctttaccaacttgggc
caggccatgtacctcacctcccccactgagatacagaggatcacatacagtcaggagacc
tgtgagaacctgcaggagatgctgggagaactgttcacaccagtggaaaccccagaggct
cccaaccgaggattcttcaagggcctttttgggggaggagcaacttctctggacagagag
gaactatttggtgagacacaggcgggtaaggcatcccgtggccttgcccagcacatccca
ggtcctcagggactggagggcatgaagggggcagcctcgggcgtggtggccgacctggcg
cgtgcccggatagcactggatgagagagggcagaaactgggcgagctggacgagaggacg
gctgccatgttggccagcgccgactcctttggcaaacacgcccacgacatgatgctgaag
tgcaaagacaagaagtggtaccagttctga
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integrated database retrieval system
