Oncorhynchus tshawytscha (Chinook salmon): 112217709
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Entry
112217709 CDS
T05605
Name
(RefSeq) F-box only protein 30-like
KO
K10307
F-box protein 30
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112217709
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112217709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
112217709
NCBI-ProteinID:
XP_024233954
UniProt:
A0A8C8I6F6
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All DBs
Position
LG18:complement(24169225..24173897)
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AA seq
891 aa
AA seq
DB search
MALQHTHCVTCLSQRCMTRPEPGISCDLVTCPLVCGAIFHTCKGPEHRLLCPLERVPCLN
SGFGCPATLVRTRIPAHLEVCPAGVVCCTMEWNRWPISCLDYTSYESLSWGVEETEQLDM
ALALQDQHTLIESLKVVAMAPTVERQPTVVAVESEKDTASDSAVLVVADPIAATSESPPP
LTPQSPPPLTPQSPPPMTTHSQPPLTPPLGSAKDKIANGINGLNEERYSKLYEATVETAR
SLAAALDVLSSANNTSDNNTEQHMNGGAMLEPQHRENSSDRNEELLLHNRLEVKGLVAEG
VNLKECYGQLHQLHQATVQLRRSLVTALGDLGNTVKYTDPINGAPSHPQAEPNSSFHQLE
DADSINVEMKDAEAGSSVGPLRVVSRTDSEVAMNVVADGNMQMELLGGASKSVEGMDGQS
LCNGCLSGEGSQKRPQEQVLGSDSADQQQPGTSWSTSETVCLVKVQDDLNLSPVPQGSCV
SQSQTQPQSHPDPPLAPPLHIHQGIAHRASHVVLEDRGLERKFQNHQLLRGLGQFALSNG
RRVRVRFRPKMEDKAVDTSDLEQEDDPMGLGEIDLITAALLFCLEESRKCRRISETTYVD
GFHVDFGTQTFTFPAAILVTSTRVGDVASAAACDHAPQLSYPSPFRTLRLDLVLEEVPQI
RNMPCNRLQQMFSFVCGQLFRRDEYSSHFKNVHEDIHAGLNGWMEHRCPLAYYGCTYSQR
RFCPSSQGSKVIHDRNLRSFGVQPSPVGGEPLGESQSDQFSGLPFEVLEHVARFLDGFSL
CQLSVVSRTMRDVCASLLQSRGIVELRWERRQYPNGTFSWQIKDRVWRFSTAFSPVSEWR
FAEVSSMSDHLRTCRYNTVERKMEAVPLPSMCTARDRSLLSILKLQEKHMT
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaacatacccactgtgtgacctgcctgagtcagaggtgcatgaccaggcct
gaacctggtatctcctgtgacctggtcacctgccccttggtctgcggggccattttccac
acctgcaaaggacccgagcaccgcctcctctgccccctggagagggtgccctgcctgaac
agtggctttggctgccctgccaccctggtgcggacccggattcccgcgcatctggaggtg
tgcccagcgggcgtggtgtgctgcaccatggagtggaacaggtggccgatcagctgcctg
gactacacctcatacgagagcctgagctggggggtggaggagacagagcagctggacatg
gcgctcgccctgcaggaccaacacacactgatcgagtccctcaaggtggtcgccatggcg
cccacggttgaaagacagccaacggtggtcgccgtagagagcgagaaggacactgcttcg
gactcagcggtgctggtggtggccgaccctatagctgccacttctgagtcaccaccacca
ttgacgccgcagtcaccgccaccattgacgccgcagtcaccaccaccaatgacgacgcat
tcacaaccaccattgacaccaccgctgggctcagcaaaggataaaattgccaacggaata
aacggtttgaacgaggagcggtatagcaagctgtacgaggccacagtggagacggcgagg
agccttgccgccgcgttggatgtcctcagcagcgctaacaacacctctgacaacaacaca
gagcaacacatgaacggaggagcaatgctggagcctcagcatagagagaacagcagtgac
aggaatgaggagctgctgcttcacaacagactggaggtcaaaggtcttgtagctgagggt
gtgaatttaaaggagtgctatggacagctgcaccaactccaccaggctacagtccagcta
aggaggagcctggtcacagccctgggtgacctcggcaacacagtaaaatacacagaccca
atcaacggagccccctctcaccctcaggcggaacctaacagcagcttccaccaattggaa
gatgcagactcaattaatgttgagatgaaagatgctgaggcaggatcatcagtcggaccg
ctgagagtggtcagcagaaccgacagtgaggttgccatgaatgttgttgctgatggcaac
atgcagatggaacttttaggtggggcctcaaagagtgttgaggggatggatggacagagc
ctatgtaatggttgtttgagtggggaaggctcccagaagaggccacaggagcaggtctta
ggttcagattcagcagaccagcaacagcctggaaccagttggtccaccagtgaaaccgta
tgcctagtcaaggtgcaagatgacttgaacctgtcacctgtgcctcaagggtcctgtgtg
tctcagtcacagacacaaccccaatctcacccagaccctccactagcaccacccctgcat
atccaccagggtattgcacacagggccagccacgtggtcctagaggacagagggctggag
aggaagttccagaaccaccagttgctcagaggcttgggccagtttgctctgtccaatgga
cgaagggtccgggttaggtttagacccaaaatggaggacaaggcagtggatacatcagac
ctggagcaggaggacgaccccatgggcctgggggagatcgacctgatcacagcagccctc
ctcttctgcctggaggagtctcgcaagtgccgcaggatctctgaaacgacctatgtagac
ggcttccacgtcgacttcggcacgcagaccttcactttcccagcggccatcttggtgacc
agcacaagagtgggcgacgtagcgtctgcagctgcctgcgaccacgcgccccaactatcc
taccccagccccttccgcaccctccgcctagacctggttctagaggaggttccacagatc
cggaacatgccatgtaatcgtctccagcaaatgttctccttcgtttgtggccagctgttc
cgcagggatgagtactcctcccacttcaagaacgtccacgaggacatccacgcgggcctc
aatggttggatggagcaccgctgtcccctggcttactacggctgcacctactcccagcgc
aggttctgcccctcatcccagggttcaaaggtcatccatgaccggaaccttcggtcattt
ggggtgcagccaagccccgttgggggggaaccgttgggcgagtcccaatcagaccagttc
agtgggcttccctttgaggtgctggaacatgtggcccgcttcctagacggcttcagcctg
tgccagctgtctgtggtgtcgcggactatgagggacgtgtgtgctagcctgctgcagtcc
cgggggatagtggaactacggtgggagaggaggcagtacccaaacggaaccttctcatgg
cagatcaaagacagggtgtggagattcagcactgccttcagccccgttagtgagtggcgg
ttcgccgaagtctccagcatgtccgaccatctgaggacgtgccgctacaacaccgtcgag
cgcaagatggaggccgttccactgccgtccatgtgcacagccagagaccgatccctcctc
tccatcttgaaactccaggagaaacacatgacctaa
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