Oncorhynchus tshawytscha (Chinook salmon): 112217720
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Entry
112217720 CDS
T05605
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112217720 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112217720 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112217720 (esr1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112217720 (esr1)
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3A. Estrogen receptor
112217720 (esr1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
112217720
NCBI-ProteinID:
XP_024233971
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Position
LG18:complement(23436457..23459289)
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AA seq
623 aa
AA seq
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MLVRQSHTQISKPLGAPLRSRTTLESHVISPPKLSPQQPTTPDSNMYPEETRGGGGAAAF
NYLDGGYDYTVPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPQ
LSPFLHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSAAGSG
VRVFEMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRN
RRKSCQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGDREKPYGDLEHRTAPPQ
DGGRNSSSSSLNGGGGWRGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLL
TSMADKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQ
DLILDRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSV
ESLHNSSAVESMLDNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLY
SIKCKNKVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMRGSQDT
HIRSPGSGVLQYGSPSSDQMPIP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacgtcatctcccccccaaaactctcaccacagcagccgacc
acccccgacagcaacatgtaccctgaggagacacgcggaggtggtggggcggccgccttt
aactacctggacggagggtatgactacacagtccctgcccaaggcccggcccctctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagcccccag
ctcagccccttcctccaccccccaagccaccatggtctccccagccagtcatactacctg
gagacctcgtccacacccttatacaggtcgagtgtggtaaccaatcagctgtcagcgtca
gaggagaagctctgcatcgcctccgataggcagcagtcgtacagtgcagcagggtcaggg
gtcagggtgtttgagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcc
tctgggtaccactacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagc
atccaaggtcacaatgactacatgtgccctgcgactaaccagtgtacaatggacaggaat
cgtaggaagagctgccaggcatgccgcctcagaaagtgttatgaagtggggatggtgaaa
ggaggcttgcgtaaggaccgcggtgggcgggttctcaggaaggataagcggtattgtggc
cctgctggtgacagagagaaaccctacggtgacctggagcacaggacggcgccccctcag
gacgggggtaggaacagcagcagcagcagtctcaatggtggtggaggatggcgtgggccc
agaatcaccatgcctcctgaacaggtgctgttcctgctgcagggggcagagcctccggcc
ctgtgttctcgtcagaaggtggcccgcccctacacagaggtcaccatgatgaccctgctc
accagcatggctgacaaggagctggtgcacatgatcgcttgggctaagaaagtaccaggt
ttccaggagctgtctctccatgaccaggtgcagctgctggagagttcctggctggaggtg
ctgatgatcggactcatatggcggtccatccactgccctgggaaactcatcttcgcccag
gacctcatactggacaggagtgaaggggactgtgtggagggtatggctgagatcttcgac
atgctcctggccactgtgtctcgcttccgcatgcttaaactgaagcctgaggagtttgtg
tgcctcaaagccatcatcttgctcaactctggtgccttctccttctgttctaactctgtg
gagtccctccacaacagctcggcagtggaaagcatgctggacaacatcacagacgccctc
atccaccacatcagccattcaggagcctctgtgcagcagcagcccagacggcaggcccag
ctcctgctcctgctctcacacatcagacatatgagcaacaaaggcatggagcacctttac
agcataaaatgtaagaacaaagtgcctctgtacgacctgctcctggagatgctggacggt
caccggctccaatccccaggcaaagtggcccaagctggggaacagaccgagggcccctct
accaccactaccacctccacaggctccagcatagggccgatgcgaggcagccaggatacc
cacatcagaagccctggttcgggggtactccagtatggctcccccagctcagaccagatg
cccattccgtga
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