Oncorhynchus tshawytscha (Chinook salmon): 112217731
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Entry
112217731 CDS
T05605
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112217731
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112217731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
112217731
NCBI-ProteinID:
XP_024233991
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All DBs
Position
LG18:23104085..23113010
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AA seq
974 aa
AA seq
DB search
MGVHDLWSILGPVRESVPLYSLTGKTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKAETMSKRSDMRFGGFDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDAFLYGAQTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLAILLGCDYIPKGIPGVGKEQALKLIRTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCRHPGSAKAHERSGCVLCDSKHFCEPQDYDYQCP
CHWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKWRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYTELMNRKHGRATLSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVELYLREKAENKTKKKKPKCKKD
KPSDHCGVSDLLAKMSLHSSTADNNTQQPSAVAAALTITTSNNSVLVLEGPESESPKKHL
DPGKEHPRLEVRLGAQIQEVMTPPSFTSSGKIPEAATPPSVSVVMDALHLSDIDWESQSF
TSSPPPQAAGARTATDPKSLQTTNDSVEERITKLGPSTDLRAAEAVPGPCYAECSLRDRV
LMRNACKSVNMADNDDVTIIHVNSQSAAPPDLIDSNNSGPKPMALIPIKSSNDSKSSEQP
LVCGKKATLVDKDQSIALLHKPQPAHHISKPISLNSTQTGPVTATQKGPVTATQTQGAKQ
HGAGEPKPPQKYRFVKKAISSSALPQRSHSEPSDTQPGRDDRNMKSHQETKKSVCARVCS
SSEDSDTENQCWGGGQSRAKVKPKSRHRCQYLTDYSLKPTSKPSTSTKAAWDTVTAQPVR
PRAVSASMGEQPIRGSSVSTIGKCQDVHPIRVDDDIVFIPSPVSPVTMSDGDDSVICSKS
PLPLAERVKLKFLK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgacctgtggtccattctggggccggttcgggagtcggtgccgttgtac
agcctcaccggaaagaccctggccgtggaccttagcctgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgttttttagagtt
tcctctctcacactgatgggggtaaagctagtttttgtcatggagggagaggcccccaaa
ctcaaagcagagaccatgagcaagaggtcagacatgagatttggggggttcgacaagtca
gcccctaaaaaacaaactacaaagaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcggcaggggaggct
gaggccatgtgtgcctttctggatgcccagggcctggtggacggctgcatcaccaatgat
ggggacgcttttctctacggagcgcagactgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacactcgtgggtctggccatccttctgggctgtgattatattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcatacggacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggcgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgtcgccatcctgggtcagccaaggctcatgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgagcctcaagactatgactaccagtgtcct
tgtcactggcactgctgtgagcagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaatggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaaacactataccagtgagaaggttctggtc
ctgatgacgtatactgagctgatgaacagaaaacatggaagagcgacgttgtctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacatgtggtggagctg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagtgtaagaaagac
aagccttcggatcactgtggtgtttctgacctcctggccaagatgtctttgcacagttcc
actgctgacaacaacacccaacaaccctctgccgtggcagcagcactgaccattacaaca
agtaacaactcagtgttggtcctggagggtccagagtcagagtctccaaaaaagcatctg
gatcctggtaaagaacatccccgcttagaagtacgtcttggagctcagatacaggaagtg
atgacacctccgtctttcacttcctctgggaagattccagaagcagcgacccctccgtct
gtttccgtggtgatggatgctcttcacctgagtgacatcgactgggagtctcagtcattc
acgtcctccccgcccccgcaggctgctggcgctcgcactgccactgaccccaagtcactc
caaaccacaaatgatagtgtcgaagaaaggatcacaaaactgggcccctctactgatctc
agagcagcagaggccgtaccagggccatgttatgcagagtgttcgctgagggacagggtc
ctaatgagaaacgcatgcaagtctgtgaacatggcggacaatgatgacgtcaccatcata
catgtaaactcccagtcagcagcaccccctgatttaattgattctaacaacagtggcccc
aagccaatggcactgatacccattaaaagcagcaatgattccaagtcatcagaacagccg
ctggtgtgtggcaagaaagccacacttgttgataaagaccagagcattgcattgctccat
aagcctcaacctgctcatcacatctcaaaacctatctcattgaactcaacacaaacaggc
ccagtcacagcaacacaaaaaggcccagtcacagcaacacaaacacaaggggctaaacaa
catggtgccggtgaaccaaagcctccacagaagtacagattcgtaaagaaggccatatca
tcttccgctctgccacaaaggagccactctgaacctagcgacacacagcctggtcgggat
gacaggaacatgaagtcacatcaagaaaccaagaagagtgtgtgtgccagagtgtgttca
tcgagtgaggacagtgacacagagaaccagtgttggggaggagggcagagcagggccaaa
gtcaaacccaaaagcaggcacaggtgccaatacctcacagactactcactgaaacccacc
tccaaacccagcacctctacaaaggcagcctgggacacagtgacagcccagcccgtcagg
cctagagctgtgtctgccagtatgggtgaacaaccaatacgaggcagctctgtgtctacc
attggaaagtgccaggatgttcatccaattagagttgatgatgacattgtgttcattcca
agccccgtttccccagtgactatgtctgatggtgatgactcagtgatttgcagcaagagc
ccactgccattggcagagagggtgaagctgaagttcctgaaatga
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