Oncorhynchus tshawytscha (Chinook salmon): 112217786
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Entry
112217786 CDS
T05605
Name
(RefSeq) RNA-binding protein 15
KO
K13190
RNA-binding protein 15
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112217786
03041 Spliceosome [BR:
otw03041
]
112217786
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
112217786
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112217786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
112217786
NCBI-ProteinID:
XP_024234086
LinkDB
All DBs
Position
LG02:32179446..32184610
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AA seq
834 aa
AA seq
DB search
MKGKERSPVKKRSRILDDIRDRGGSHPTSKKMGTLSAAGSNGNSSVKSGGSVKRSLPSEK
RDCRDLDGHVSNRTGSSHGYANTTGSSSKLHISIALDPTTRTNSRGEPRPLPSNESEYKT
LKISELGSQLSDEDIEDGLFHEFKKFGDVSVKISRVNDERVAFVNFRRPDDAKAAKHARG
KLVLYDRPLKIDAVYMNRRRSRSPIEKDPYAGVAGHRHLHVQRPLSPTGLGYRDFRLQQL
ALGRLPPPSSLPRELEREREFSIYEARARPPFIPDCAAFCEEDLLSPEDDQRANRTLFLG
NLDVSVTENDLRRVFDRFGLITEVDIKRTSARGQNSTYGFLKFENLDMAHRAKITMSGKV
VCHNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDTWAYIQYE
SLDAAQAACSHMRGFPLGGPERRLRVDFADTELRYQQQYLQPLPLPPHFDLVADSFVHRP
TLEAIRIRERSPPPPLRFRERELYNADWAGPAVCERVRGAAFEPVEHLERRSREPWSLER
ELQSRDQARKRRLLEDGRRPDRSPNSSEHGRRRHGASLERSPGGSSRDGGRYSPPRSDRP
SPVRELRASLGRGTGDKRLRTDSPERDRKRKASDSCTSPVKREDRSDHPSSSMSSLQSKQ
GAGGQKLCQAWHGVLLLKNSSFPTSMHLLEGDLAVAARLLVESSTGGQVSQLKITQRLRL
DQPKLDEVSRRMKTAGPSGYSVLLAVPGSCEEGPQDVGSSTERPLKNLVSYLKQKQAAGV
ISLPVGGTRDKDGAGVLHAFPPCDFSQQFMDASAKALAKTEEDYLVMVIVRGAS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaggagcggtcgcccgttaaaaagcgctcgcggattctggacgatattcga
gaccggggaggaagccacccaacaagtaagaaaatgggaacactctcggcggcaggcagc
aacgggaatagttctgtgaaaagtggtggttcggtaaaacggagtttaccgtctgaaaag
agagactgtcgagatttagacggacatgtgtcaaatcgaactgggagtagccatggatat
gctaatacaactggttcgagtagcaagctacacattagcattgctctggaccccacgaca
aggaccaattctcgcggggaaccgcggcctcttccgagtaacgaaagtgagtacaagact
ctaaaaattagcgagctgggctctcagttgagcgacgaagacattgaagatggattattt
cacgaatttaagaaatttggggacgtgagtgtcaaaataagccgagttaacgacgaaaga
gtggcatttgtgaatttcagaaggcccgatgatgctaaggcggccaagcacgcacgcggc
aagttggtactctatgaccgccctctaaaaattgacgcggtgtacatgaaccggaggagg
agccgatcccccattgaaaaagatccatatgcaggagttgcaggacacagacatttgcat
gtccaaagacccctttcaccaacggggctaggatatagagatttccgactgcagcagcta
gctttgggccgcctcccccctccctcctccctccctagagaactggaaagagagagggaa
ttttctatctatgaagccagggcccggccacccttcatccctgactgtgcagctttctgt
gaggaggacctcctctcccctgaagatgatcagcgggccaacaggacgttgtttcttggc
aacctcgatgtctcagtgacagagaatgacttgaggagggtgtttgacaggtttgggttg
atcacagaggtggacatcaagcggacatccgctcgcggacagaacagcacctatggattc
ctaaagttcgagaacctggacatggctcaccgtgctaagatcaccatgtcaggaaaagtg
gtgtgtcacaaccctattaaaattggctatggcaaagcgacacccacaactaggctgtgg
gtggggggtcttggcccctgggtcccccttgctgctctggctagggagtttgaccgcttc
ggcaccatcaggactatagactacaggaagggggacacgtgggcctacatccagtatgag
agcctggacgctgcccaggccgcctgctcccacatgcgtggctttcctctgggtggtcct
gagaggagacttagggtggactttgctgacacagagctccgctaccagcaacagtacctg
cagcctctccctctgccgcctcactttgacctagtggcagactcatttgtccaccggccc
accctcgaggccatcagaatcagagagaggagccctccacccccactccgcttcagggaa
agggaactgtacaacgcagactgggctggcccagcagtctgcgagagggtgcgaggggca
gcttttgaacccgtggagcacctggagaggcgttcacgtgaaccctggtctctggaacgg
gagctgcagagccgagaccaggcccgaaaacgtcgcctcttagaggatgggcgtcgcccg
gaccgctcaccaaacagcagtgaacatgggcgtcgtcgtcacggcgcctctctggagcgc
agccctggtggcagcagccgggacggggggcgctacagccccccgcgctccgatagaccc
tctcccgtcagagagctgcgggccagcctaggccgtggcactggggacaagcggctgcgg
acagacagcccagaacgggaccgcaaacgcaaagccagtgactcatgcacaagccctgta
aagagggaggaccgctctgatcacccctcctcttccatgtccagcctgcagtctaagcag
ggggccggggggcagaagctgtgtcaggcctggcatggcgtgctcctgctgaagaacagc
agcttccccacctccatgcacctgctagagggggacttagctgtggcagccagactactg
gtggagagctccactggtggtcaggtgtcccagctaaagatcacccagcgcctgcgtctg
gaccagcccaagctggatgaggtgtcccgtcgcatgaagactgcaggccccagcggctat
tctgtcctcttggctgtgcccgggagctgtgaggaggggccccaggatgtgggaagctcc
accgagaggcctctaaagaacctggtctcctacctgaagcagaagcaagcagccggcgtc
atcagcctgcctgtgggtggcacccgtgacaaggacggcgcaggagttcttcacgctttc
ccaccctgtgatttttcccagcagttcatggatgcctcagctaaagcccttgccaaaacc
gaagaggactacctggtgatggtcattgtccgaggagcctcataa
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