Oncorhynchus tshawytscha (Chinook salmon): 112217816
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Entry
112217816 CDS
T05605
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112217816
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
112217816
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
112217816
NCBI-ProteinID:
XP_024234132
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All DBs
Position
LG18:complement(27587482..27607013)
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AA seq
672 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGAWYYQRAVTLQPAEHDGTLWKRIISVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDNGQFGFHNGLECV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEDDEEQEQSAVAW
HKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYVIHSMDPDNLELTFDFFEEDMG
EHVVPGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCVPIVYHDLTCCISTKKKGDKLSLDLFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDEEEEVDEHQPFPSFSQIFQAVPENVGFNIELKWVSQMRDGSWEGNLSSYFNMNL
FLDIILTCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISEIYPELMDIRCR
TTQIAMSFAQSENLLGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQPNIFKVEEQHTLQETLKSFVCSCYTIPCQAAPVCPSSTSKEHN
GSAESDSGLSSS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggagcctggtactatcagagagctgtgacccta
caacctgctgaacacgatggcacattgtggaagaggatcatcagtgtgcccagaggtgct
gtgtcaacctatcgctatttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccaccagcagccacgcctgatgagccccaca
gaatcacaccttgatattgacaatggccaatttggattccacaatggcttagagtgtgtg
gactctgggtggctgacgtgccagacagagatccgtttgcgtctgcactactcaaagacg
tctcctgtatccatcaccaagaagaaatataagaagtctcgcttcaggatcaagctgaca
ctggaaggtgtagaagaggaggaggatgatgaagagcaggagcagagcgcggtggcgtgg
cacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcccgc
cactcccagcctgagtgtggttacgccctggaggcctcacagtggacagagtatgtcatc
cactccatggaccctgacaacctggaactcacctttgacttctttgaggaggacatgggt
gagcatgtggtgccaggggatgcccacccggggaccgtgggtacggcctgccttctctcc
tcattctttgtggagagtggcaaggacacgggtgtggtcacactgcccatcatgaaacgc
aactccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcctatcgag
ggactgcagtgtgacatgagctcgtccttcaccaagtactggaggaagaggagtgcccct
ctggacgtgggccacagaggggccggcagcacacacgcagccaaacataccaaagttagg
gagaacacaattgcctcgtttaaaagtgctgccaatcatggggctgcctatgtagagttt
gacgtccatctctccaaggactgcgtccccatcgtgtaccacgatctcacctgctgcatc
tccactaagaagaaaggagacaaactctctctggacctgtttgaagttcctgtcaaagac
ctcacatacgaccagcttcaacagctcaagttgggccatgcttctgccttgaaggtgaac
gaccacaaagatgatgatgaagaggaagaggttgacgagcatcagcccttcccttccttt
tcccagatattccaagcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgggtt
tctcagatgagggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaacctg
ttcctggacatcatactgacctgtgtgctgcagagagctggcaagagacgcatcgtcttc
tcctgcttcgaccctgacgtctgcactatggttcgtcagaagcagaacaagtaccccatc
ctgttcctgacccagggcatctctgagatctacccggagctcatggacatccgctgtcgc
accacacagatcgccatgagcttcgcacagagcgaaaacctcctgggtattagtgcccac
actgaggagctccttcagaatctggagcacatccgagaggcccagtctaaaggcctggta
gtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctacgggaacag
ggcattgacggactcatctatgacaggatctgtgacgaccaggtcgagcagcctaacatc
ttcaaagtagaggagcagcacacgctgcaggaaacgctcaagagctttgtgtgttcctgc
tacaccatcccctgccaggcggctcctgtctgcccctcctccacctccaaggagcacaac
ggcagtgcagagtctgactcgggcctcagctcctcctga
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