Oncorhynchus tshawytscha (Chinook salmon): 112217829
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Entry
112217829 CDS
T05605
Name
(RefSeq) transcriptional repressor protein YY1 isoform X1
KO
K09201
transcription factor YY
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112217829
03083 Polycomb repressive complex
112217829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112217829
03036 Chromosome and associated proteins [BR:
otw03036
]
112217829
03029 Mitochondrial biogenesis [BR:
otw03029
]
112217829
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112217829
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
112217829
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
112217829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Raffinose_syn
IBR
Motif
Other DBs
NCBI-GeneID:
112217829
NCBI-ProteinID:
XP_024234168
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All DBs
Position
LG18:28871959..28879293
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AA seq
391 aa
AA seq
DB search
MASGDTLYIEADGSEMPAELVELHEIEVETIPVETFETTVVGGDDDQPMIALQPLVSDDP
NSIHHHHQEVILVQTREEVVGGDDSDMLEDGGYEDQILIPVPAPGVEDEYIEQTLVTVAG
KNSVGRMKRGVGGSGKKAGQKSYLGAVEPSSRKWEQKQVQIKTMEGEFSVTMWASDDKKD
IDHESVVDEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARSVSICLNSPV
HQGSFSESAGPYGQNSVWMKPRKVKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPR
VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY
VCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcgatacgctttatattgaggcggacggctcggagatgccggccgaacta
gtggagttacacgagatagaggtggaaacgataccggtagagactttcgagactacagtg
gtcgggggagacgacgaccagccgatgatagcactccagccgctggtatcagacgacccg
aattcgatccaccaccaccatcaagaagtgatcctagtgcagacaagagaggaagttgtt
ggcggggatgattcggatatgcttgaggacgggggttacgaggatcaaatcctcatcccc
gtcccagcacccggggtggaagacgagtacatcgaacagactctggtgactgtagccggg
aaaaactcggttggtcggatgaagagaggggtaggcggcagtggcaaaaaagctggccaa
aagagttatttgggtgctgtagaaccaagcagtagaaaatgggaacagaagcaggtgcaa
ataaagactatggagggggaattctctgttacaatgtgggcttcggatgacaaaaaagac
attgaccatgagtcagttgttgacgaacagatcattggggagaattcccctccggactac
tctgaatacatgacggggaagaagctgccccctggagggatacctggcatcgacctgtca
gaccccaaacagctggcagagtttgccaggtcagtgtctatctgcctaaactcacctgtc
catcaaggttccttcagtgagtctgctggtccctatggtcagaactccgtgtggatgaag
ccgaggaaggtaaaagaagacgacgcgcccaggacgatagcctgccctcacaaaggctgc
acaaagatgttcagggacaattcagcgatgaggaagcatctccacacccacgggcctcgt
gtgcacgtctgtgccgagtgtggcaaggccttcgtagagagttccaaactcaaacgtcac
caactcgttcacacaggggagaaacccttccaatgtacctttgagggctgtgggaagagg
ttttcgctggactttaacttgcgcacacacgttcgtatccacaccggtgaccggccctac
gtatgcccctttgacggctgcaataagaagtttgcccagtcaaccaacctcaagtctcac
atcctcacacacgccaaagccaaaaacaaccaatga
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