Oncorhynchus tshawytscha (Chinook salmon): 112217830
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Entry
112217830 CDS
T05605
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112217830
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112217830
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_5
ig
LRR_9
Ig_2
fn3
Sp38
DHU1_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
112217830
NCBI-ProteinID:
XP_024234175
LinkDB
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Position
LG18:complement(28901034..28931587)
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AA seq
773 aa
AA seq
DB search
MKTLLVYLMVLGMAVKAHKVQVCPKRCVCQMLNPNLATLCDKKGLLFVPPDIDRHTVEMR
LGDNFVTSIKRRDFANMTKLQDMTLSRNTIGSISPHAFKDLENLRALHLDSNRLTRLTND
TFSGMSKLQHLILNNNQLIHIHIGAFNDLTALEELDLSYNNLESAPWVAIQRMTSLHTLG
LDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGSLGPTSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVALRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHSDGTLDILISTVKDSGSFIC
VASNPAGESQQTVDLVIAKLPHITNSTVEKEQDPGSSDIATVTRTGGGGEGGGVVPLGNT
KTSQEKKVVIAEATSTSALVRFSFQRSIPGIRMFQIQYNGTYDDSLVYRMIPPSSKSILV
NNLAAGTQYDLCVLAIYDDLVTSLTATRVVGCVRFTTDPQYLRCHFMQSQFLGGTIVVII
GGIIVASVLAFIVFLIVRYRVCNQGDEDKALEMGEIRSLSSDGQLQGCGVPKSMSKSLSK
QILCLEKPEKVDKEYLRVGLPPPELFKQQRPPVLTTTKSTKPSIPDCQTNVELENTNRNN
SAEAKMVVSAVSTKWTKVTRGPSPPGGSSHHYMTVLAGGVRVNRRHSLNMDSYKECCYFS
LVQQQQPKPGRGLRSKRSLSMSGELPQLESTMANIHRSRDKLYGSEWLLESTL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccctgttagtttacctgatggtacttggcatggctgtaaaagcccacaaggtt
caggtgtgcccaaaacgctgtgtctgccagatgcttaaccccaacctagcaaccctctgc
gacaagaagggcctcctcttcgtccctcccgacatcgaccgtcacaccgtggagatgcgt
ctgggcgacaacttcgttacgagcatcaaacgacgggacttcgccaacatgaccaaactg
caagacatgacgttgtctcggaacaccattggctccatctcgcctcacgcctttaaagat
ctggagaacctcagagccttgcatctggacagcaaccgtctgacgaggctcaccaacgac
accttcagtgggatgtccaagctccaacatctcattctcaacaacaatcagctgattcac
atccacatcggggccttcaatgatctcacagctctagaggagttagatctgtcctacaac
aacttagaaagcgccccctgggtggccatccagagaatgaccagcctccacaccctgggc
ttggaccacaacatgcttagctacattcctgagggaaccttctctggcctgcagaagctc
aaacgccttgacgtcacatccaacaagctccagaagcttccgccagacccagtgttccaa
cgtgccggcgtcttggccacatcagggagcttgggtccgacatcatttgcgttgagtttt
ggggggaacccactgaggtgtaactgtgagctgctgtggctgaggaggctgaggagggag
gatgatctggagacatgtgcggctccgcagcacctggctgggcgatacttctggaccgtg
tctgaagaagagttcctctgtgagccccctcttatcaccagacactcccaggagctgcga
gcattggagggtcagagtgtagctctgcgctgtaaggccaggggcgacccagaccccatc
atccactggatcgccccagacggccggctcatgtccaactcctcccgggctgcggtgcac
agtgatgggaccctggacattcttatcagcactgtgaaggactcaggctccttcatctgt
gttgcctccaacccggccggggagtcccaacaaactgttgacctggtgatcgccaaactc
ccacacatcaccaacagtactgtggagaaggaacaggacccaggttcttctgatatcgcc
acggtaacgaggacgggtggtggtggggaaggcggaggagtggttccactgggaaacaca
aagacgagccaggagaagaaggtggtgatcgctgaggccacgtctacctcggccctggtc
aggttcagcttccaaagaagtataccgggcatccgaatgttccagatccaatacaatgga
acctacgatgactctctggtttacagaatgatccctccgagcagtaagagtatcctggtg
aacaacctggctgccggtacacagtacgacctgtgtgtgctggccatctacgacgacctg
gtgacctccctgaccgccacgcgggtggtggggtgcgtccgcttcaccaccgatccccag
tacctccgctgccacttcatgcagtcccagttcctgggagggaccatcgtggtcatcatc
ggagggatcatcgtggcgtccgtcttagccttcatcgtcttcctcatagtgaggtaccga
gtctgtaaccaaggcgatgaggataaggctttggaaatgggtgaaatccggtctctgagc
agtgatggtcagctccagggctgcggcgtccccaagtccatgtccaagtctctgtccaag
cagattctctgtctggagaaaccagagaaggtggataaggagtatctgagggtgggcctt
cctccccctgagctgttcaagcagcagcgacccccagtcctgaccaccaccaaatccacc
aagccatccattcccgactgccagacaaatgtggagttagagaacacaaaccggaataac
tcagcggaagctaaaatggttgtttccgccgtttccacaaaatggacaaaggtcactaga
gggccaagcccccctggagggtcctcccaccattacatgacagtgctagcagggggcgtg
agggtgaaccggcggcactctctgaacatggactcgtacaaggagtgctgctacttcagc
ctggtacagcagcagcagccaaagcctggtaggggtttgcgctccaaacgcagtctgtcc
atgagtggagaactgccccagttggaaagtacaatggcaaacatacatagaagcagagac
aagctgtatgggtccgagtggcttctcgaaagcactctatga
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