Oncorhynchus tshawytscha (Chinook salmon): 112217867
Help
Entry
112217867 CDS
T05605
Symbol
tdrd6
Name
(RefSeq) tudor domain-containing 6 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112217867 (tdrd6)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112217867 (tdrd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
112217867
NCBI-ProteinID:
XP_024234231
LinkDB
All DBs
Position
LG18:31178111..31199500
Genome browser
AA seq
2303 aa
AA seq
DB search
MCSIPGLPTPGSNVSVLITRVNCNPQCDIVELWGNFDQERKIAYQRLRKDIQFPREIFRE
LEGNPGDVCLVQIYETWYRVRIVSRNGSSYNVFLIDEGRMLGVTTSMLAWGQKEFFHLPP
EVEFCVLSNVLPVSPENRWSPVALEFLKSLCGKTVDACVQDILVPHRTFLLDVPCVSRQM
HEMGFAKKLSTDKFKLYVSKSLQSGASNSTEYPQKSSVRNDPLETREQIEKQQHYMYPEL
QTETVETVIVTEVTNPLRVFCQLKVFSQELKKLTEQITQHYEGRVETGITRPETLGSPCA
SRASDGRWYRSMLQHVFPANNVVEVLHVDYGKKQFVQAENIRPLATEFFRMPVVTYVCSL
HGVIDKGVGWTAAQIEYLKSLLLNRTVIAKFEYQSLSEGVHYVTLYGNENTNINKLFGTK
ERCLLDSEKVHGDYAVRNNCASPPHPDGIKFQETAPPNSGDPMEIKAKYPAEDLPLNSSH
VAVVQHVENPSEFWIHTQMYADAFNQMMNDLADLYSNPVSAGVIECPKVGLYCAARSQDN
SFYRATVSEVTGNKARVFFFDYGNTELIDWFNLGVLPDKFKELPALALKCRLAGIRPKEE
KWSRNATDFFTKSIADKILDVHVTAKSHGAYIVQLMDSSAHGERDVSKLLCSAGYAEKGD
TSKTPHKASLRPIIAPTTQNPRAIPYDVFKASVGPQGLSTSDSTVKESRTAFKEYLFPIG
SSVEANVSYIDSPNDFWCQLAQNSNHLKWLMQDIQQHYADTEFGQPVEPACVARHPDNGM
WYRALVIQKHATLHVDVLFIDYGQTKTVSLQDLRRIDPNFMQLKGQAFRCSLYNLILPTS
HTTEWPEDAIRQFHDFVDTAASDHRVLKCTIYAVMYNAQKVVFNVVDLETPFQSVCNLMV
QKGLANRAPAKKVPSSPFRLDTYYYSTHNIKTGSEEEVSVTSVKNVNHFYCQLKRNADTV
KGLAETINTLCRQLEITNCPQTFGTVCFAKYTDGEWYRGQIKSRNPTILVHFVDYGDTLE
VIKSDLLPIPIEASEIMSVPVQAVQCGLSDIPGEVTSEVNGWFETSMTDRNFRALVVAKD
PGGKLLVELYDRKMQVNAKIKEKFNLEMHREEQVVHRSRRPHDGTSSHTSALEAKPLSTT
KEVLQKTDEDTQKFEKLPRAPYTTYQKRVPLRRPNERVCSEARKQPEKPIPQVETKGPQA
PKPSLSEPQKEIEVPKAKVKVLPKLSDLPSKSINPGMVADVFVSHCNSPQSFFVQLIKEE
DDIYSIVEKLNVEQSTAATIYTKDLSQGDLVNAEFPDDSSWYRAVVSEILGNETALVEFI
DFGNTATVSVSKICQLDKHFLEIPRFSIHCFLSGVTTVGNQAELNPEVVSNFKEKVGLNG
NKRLGCMFMKQSGSFWEVGLVHGSKAITCNISPSSATASSDVIHETSEGSNREAEEPQQS
PSARSVPPEMSTLVDVKTARYSKPDISEGQTVEVYASTINGPQSFWCQSAESDKLDKITE
VVADAGNAVASTLIDTETLCTGSPCIALFVDDEQWYRAEVLRKDGDALSILFVDYGNEST
VNLKAVRPMPTVLIDTPPQAFQCQLEGFDYSQGSWHDTAADQLSELIKDKLLHLTVMRVS
SQKRGGITCFLKVKCEKEMINDTMKLYWKSSVDKETSEDEDKSDPTGVAMSGDTPSLVGE
FKLVEEAAAVPNSSPEEPYKKVREHDTDYALAHSETHELVDEDKCTDISDEQQDNSVLTQ
ATDEGHAEDVDLISFQVDADCFDHLGNTESIDDDKEEEKQSYTNEIQESMTAIQGLSVKT
PNEGIETKYIPIIICEEPSDAGLECVSESGVSCEAQVATSQGNKDILVSRTKKDTLEVDK
DESGSVSVLEKAFSLDDSESRLYFDEHFDQTSLSIIYQGQDDIYEEVFKLCAEPVVESVK
SEHAVTEESETKDEELETLALELETKKEESGIRDEDVNISAVVAESEFGKLQRVEPTVPV
GSSSCVVWSSAKKSWCKAKILKIFEDSIKVLLLDHDTEMIVDPHNIFEPLSSETEESDDF
DTASSDAGSERDHEDTDDSDNTVAGDDLNKAASEVQDDSTLADVCAPLDESSDVISEELV
DIEPATDVEVVSSVPTQDNKDDDVLEEDSCLREVTSCPIGDGLVISTDDGAEIKKATYAD
VISSATPQERDDLLGESKSSPDEDCLVSTEQRTDAQEANVVEVTSSAPTQDKDDLLCHEE
VCSDYAEQFAEIEEATDVEVVSSAATQDKNDVQLEQEMSFPGEDSAEVGMSQVTHLSLRV
EENSDDDVIFVRDSDHPGTKPVQ
NT seq
6912 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaatccctgggctcccaacaccaggttcaaacgtttcagttctcataacaagg
gtgaactgcaatccccaatgtgatattgtggagctatggggcaattttgatcaagagcga
aaaattgcctatcaacgcctgcgaaaagacattcagtttcccagagaaatctttcgtgag
ttggagggaaatcctggagatgtgtgcctggttcagatatatgaaacttggtatagggta
cgcatagtctcaagaaatggctcaagttacaatgtgttcctaattgacgaagggcgaatg
cttggtgtcaccactagcatgttggcttggggtcagaaagagtttttccacctaccccct
gaggtagaattctgtgttctctccaatgtgttgcccgtgtcacctgagaacaggtggtct
ccagtggccttagaatttctgaaatccctctgcggaaagacggttgatgcatgtgtccag
gacatcttggtaccccatagaacgttcctcctggatgtgccctgcgtatctagacagatg
cacgaaatggggtttgctaagaagctgagcaccgataagttcaagctctacgtttcaaag
tcattgcagagtggggcttcaaactctacagaatatccacagaagtcctccgtgagaaat
gacccactagagacccgtgagcaaattgagaagcagcagcactacatgtatccagagctg
caaacggaaaccgtagagacggtcattgtcacggaggtaaccaacccactgcgcgtcttc
tgtcagttgaaggtgttttctcaagagttgaagaaactaacggagcagattacacaacac
tatgaaggccgagtggaaacgggcatcaccagacccgaaacgttgggttccccatgtgcc
tcaagagcaagtgacggaagatggtatcggtctatgttacaacatgtctttccagccaat
aatgtggttgaagtgctccatgtcgactatgggaagaaacagtttgtccaagcggagaac
atcagaccactggccacagagttcttcagaatgcctgttgtcacatatgtctgctccctc
cacggcgtcatcgacaaaggcgttggatggacggctgcccagattgaatatctgaaatcc
ctacttctgaacaggactgtgatcgccaagttcgagtaccagagtctgtcagagggggtc
cactacgtaacactctatgggaatgaaaacacaaacatcaacaaactgtttggcacaaag
gagagatgtttgctggactctgagaaggtgcatggagattatgctgttcgcaacaactgt
gcaagtcctccacatccagatggaatcaaatttcaggaaactgcaccaccaaactctggt
gatcccatggaaattaaggctaaatatcctgccgaagatctccctctgaattcttcacat
gtggcagttgtacaacatgtggagaacccttcagaattctggattcatacacagatgtat
gcagatgcatttaatcaaatgatgaatgatcttgctgatttgtacagcaacccagtcagt
gcaggagttatcgaatgtccaaaagttggcctttattgtgctgccagatcacaagataac
tctttttacagggcgactgtgtctgaagtcactgggaacaaggccagggtcttctttttt
gactatggaaacacagagttgattgactggttcaatctaggagtccttcctgacaagttt
aaagagttgccagcacttgcactgaagtgtaggctggccggtattagaccaaaagaggag
aaatggagccgaaatgctacagacttcttcacaaaatcaatcgcagacaagatcctggat
gtacacgtaactgcaaagtctcatggtgcttacattgttcaactgatggactcatctgca
catggagagcgagatgtcagtaagctgctttgcagtgctggctatgcagagaagggtgac
acaagtaagacccctcacaaggcctctttaaggccaatcatcgcccccacaacacagaac
ccacgtgccattccttatgatgtgttcaaggcaagtgttggccctcaaggattgtccacc
agcgattccactgtcaaagagtccagaactgccttcaaggaatacctgtttccaatagga
agttcagttgaagccaatgtgtcttacattgatagtccaaatgacttttggtgccaacta
gcacaaaattctaatcatctaaaatggctcatgcaagacatacagcagcactatgctgac
actgagtttgggcaacctgtggaacctgcctgtgttgcccgccacccagacaacggaatg
tggtacagagccctggttattcagaagcatgcaacactgcacgttgatgtgctgttcata
gactatggtcagacaaagacagtctcactgcaagacttgcgccgcatagatcccaacttc
atgcaacttaaaggtcaagcctttcgttgcagcttgtacaaccttatccttcctacttct
cacaccactgaatggcctgaagatgccattagacagttccacgactttgtggacactgca
gcatccgaccacagggtcttgaagtgcaccatatatgctgtcatgtacaatgcccagaaa
gtggtattcaatgtggtggatctggaaacaccctttcagagtgtctgcaacttgatggtt
cagaaaggactggcaaaccgtgcacctgccaaaaaagtcccttcctcccctttccggttg
gacacctactactattccactcacaacatcaaaacggggagtgaagaagaggtcagtgtg
acaagtgtgaaaaatgtcaatcacttctactgccagctgaaaaggaatgcagatacagtt
aaaggacttgcagagaccatcaacacgctttgtcgccagttggagatcaccaactgtccc
caaacttttggaactgtgtgctttgcgaaatacacggacggagagtggtacagagggcag
atcaagtctagaaatccaacaatcctggtgcactttgtggattatggcgacacattggaa
gtaataaaatcagatctgcttcccattcccattgaggccagtgagatcatgtctgtgcct
gtacaagctgtccagtgtgggctttctgatatccctggagaggttacaagtgaggtgaac
ggctggtttgagaccagtatgactgaccggaacttcagggctcttgtggtggcaaaagac
cctgggggcaagttgctggtggagctctatgacaggaaaatgcaagtgaatgcaaagata
aaggagaagttcaatcttgagatgcacagagaggagcaagtggtacaccgaagcaggaga
ccacatgatggaaccagcagccacacatcagctcttgaggccaaacctctgtctacaact
aaagaggtgttacaaaaaacagacgaggacacccaaaagtttgagaaactccctcgagca
ccctacacaacatatcaaaaacgggtacctctgaggagacctaatgagcgagtttgttca
gaggccaggaaacaaccagaaaaaccaattcctcaggtggaaactaaaggcccacaagcg
ccaaagccatccctcagtgaaccacaaaaggagattgaagtccccaaagcaaaggtgaaa
gttcttccaaaactctcagacctgccctcaaaatccataaatccaggcatggtagccgat
gtctttgtctcacattgcaatagtccacagagtttctttgtacagttgatcaaggaggaa
gacgacatttattccattgtggagaaactcaatgttgaacagtcaactgctgcaaccatt
tacactaaggacttgagtcaaggagacttggtcaatgcagagtttccagatgattcgtca
tggtaccgtgcagttgtaagtgaaatactgggaaacgaaacagctcttgttgagttcata
gactttggaaatacagcaacagtttcagtctccaagatatgtcaacttgacaaacacttc
cttgaaattcccaggttcagtattcactgcttcctaagtggagtgacaactgtcggaaac
caagcagaactgaatccggaagttgtgtccaacttcaaagagaaagttggtttaaacggt
aacaaacggttagggtgcatgttcatgaaacagtctggatctttttgggaggttggccta
gtgcacggcagcaaagcaatcacatgcaacatatctcccagcagcgcaacagcctcgtct
gatgtgatacatgagacatcagaaggctccaaccgagaggcagaagagccccaacaaagt
ccttctgctagaagtgtgccaccagagatgagcactttggtcgacgttaagactgctcgt
tatagtaagcctgacatttcagagggacagaccgtagaagtctatgcctctactataaat
gggcctcagtccttttggtgtcaatctgctgaatcagacaaacttgataagatcactgaa
gttgttgcagacgctggcaatgctgtggcatcaacgttaattgacactgaaaccctgtgc
actggaagcccttgcattgctctatttgtggacgatgaacagtggtatcgtgcagaagtc
ctaaggaaagatggagatgccctatccattctctttgtggactatggaaatgagtctaca
gtcaatctgaaagctgtgaggccaatgccaactgtgctcattgacactcccccacaggcg
ttccagtgtcagcttgaagggtttgattattcacaaggatcctggcatgacactgctgct
gaccagttatcagaactcataaaagacaaacttctacacctgacagttatgagagtatcc
agtcaaaagcggggtgggatcacatgttttctcaaggtgaaatgcgagaaagaaatgata
aatgacactatgaagctgtactggaagagctctgttgacaaagaaacgtctgaagatgaa
gacaagtccgatcctacaggagttgcaatgtcaggcgacacgccttcattggtaggtgaa
tttaagttggttgaggaagcggcagccgtgcccaactcaagtcccgaagagccatataaa
aaagtcagagagcatgacacagactatgctttggcccatagtgaaactcatgagttagtg
gatgaggacaaatgcacagacatttctgatgagcaacaggacaactccgtactcacccaa
gcaacagatgaaggtcatgcagaggatgtggatctgataagtttccaagtagatgcagac
tgttttgatcaccttggtaacaccgagtcaattgacgatgacaaagaggaagaaaaacag
tcttacacaaatgagatccaagaatccatgaccgccatacagggtctgagtgtaaagaca
cccaacgaagggatagagactaagtacattccaatcatcatctgtgaggaaccaagtgac
gcaggactcgaatgtgtctcagagagtggagtctcatgtgaggctcaagtggcaacctcc
caagggaacaaagacatcttggtttcaaggactaaaaaggacacattggaagtagacaaa
gacgaaagtgggagtgtatcagtactggaaaaagccttcagtctggatgactcagagtca
cgtctgtacttcgacgaacactttgaccagacttctctttcaatcatctaccaaggtcaa
gacgacatctatgaggaagttttcaaactgtgtgctgagcctgtcgtcgagagtgtaaag
tcagaacatgctgtcacagaggagtccgagaccaaagatgaggaactggagaccttggct
ttggagttggagaccaaaaaagaggaatctggaatcagagatgaggatgtcaacatctct
gctgttgtagctgagtctgagtttggtaaacttcagagagttgagccgactgttccagtt
gggtcatcatcctgtgtcgtttggtcctctgctaagaagagttggtgtaaagcaaagatt
ttgaagatctttgaggactccataaaggttctgctgctggatcacgacactgaaatgata
gtagacccacacaatatatttgagccgttgtcttcagaaacagaagagagcgatgacttc
gatacagcgtcttcggatgctgggtcagaacgtgatcatgaagacacagatgacagtgac
aacaccgttgcaggagatgacctgaacaaggctgcctcagaggtccaggatgactctact
ctagctgatgtttgtgcaccattagatgaatctagtgatgtgatttcagaagagctagtt
gatattgaaccagcaactgatgtagaagttgtatccagtgttcccacacaggataataag
gatgatgacgtgctagaggaagactcatgtcttagagaagtgacttcatgtcccatagga
gacggtttagttatatccacagatgatggtgctgagattaagaaagcaacctatgcagat
gttatatcaagtgctaccccgcaggaaagggatgaccttctaggggaatcaaagtctagt
cctgatgaagactgtttagtgtccactgaacagagaactgatgctcaagaggcaaatgtt
gtggaggttacatccagtgctcccacacaggacaaggatgatctgctctgtcatgaagaa
gtctgttcagattatgcagaacagtttgctgagattgaagaggcgaccgatgtggaagta
gtatccagtgctgctacacaggacaagaatgatgtgcagcttgagcaagagatgtctttt
cctggcgaagactctgcagaagttgggatgtcacaggtgactcatctctccctgagagtg
gaggagaactccgatgacgacgtcatctttgtcagagattcggaccacccaggaacaaag
ccagtccagtga
DBGET
integrated database retrieval system
