Oncorhynchus tshawytscha (Chinook salmon): 112217905
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Entry
112217905 CDS
T05605
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112217905
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112217905
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
SALM family
112217905
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112217905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_1
ig
fn3
Ig_2
LRR_9
LRR_5
LRRCT
GP79
Motif
Other DBs
NCBI-GeneID:
112217905
NCBI-ProteinID:
XP_024234279
UniProt:
A0A8C8EQ80
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Position
LG18:complement(33075749..33245116)
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AA seq
799 aa
AA seq
DB search
MDHILCCLLVLGTAVLMAHACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFSDLETLRSLHLDNNRLIELGPDDL
RGLVNLQHLILNNNQLGRISDRALEDLAPSLEDLDLSYNNLRSLPWDSVKLMVSLHQLSL
DHNLLDFIPEGTFTDLERLARLDLTSNRLKKLPPDPIFARAQDSVMMTTPYAPQLSLGIG
GNPLHCNCEVLWLRRLERDDDQETCASPSNLKGRYFWYVREEEFVCEPPLITQHTHRMLV
LEGQMASLRCEAIGDPTPTIHWMAPDDRVLGNSSRTVVYGNGTLEILITTSKDYGTFTCI
AANVAGESTASVDLSIIQLPHLSNGTGQASQPKSRLSDITGTTRISKGVPKTPPEKVVTV
SEVTAISALVKWTVSKAAPKVKMYQLQYNCSDDEVLIYRMIPASSQAFLVTNLVSGTKYD
LCVLAAWDDTATTLTATNVVGCAQFFTRDDYTQCQSLHSQFLGGTMILVVGGIIVATLLI
FIVILMVRYKATDHEGGGIGGSGKLTSVSDTHSQTNGGRLGQNGVPLPLPKPKAKVTLQD
EVVEFKCGSLQSTSSSSSSGGSVVGEGSYSPNSTLAIMWRQAAPSKPRANLDHLLGAFNS
LELRGAQGRGDLGEPSSSSSTPVAGGDRPHTDREPLLGRTMDSRLSRLLMLSHDSKPKRS
QSFDMGDCMDTDQQTDQAMASSTSTATTPVCSYPRRISNIWTKRSLSVNGMLLQCDEEGD
MGGSKGTFDSQEWVMESTV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatcctctgttgcctgctggtcctgggaaccgcagtgttgatggcccacgca
tgcccaaaatactgtgtgtgccagaacctgtccgagtccctggggaccttgtgtccctcc
aaaggcttgctcttcgtcccactggacatcgaccggcgcactgtggagctccggctgggc
ggaaactacatcctccgcatcacccagcaggactttgccaacatgaccgacctggtggac
ctgacgctcagccgcaacaccatcagctacatccagcccttctccttcagcgacctggag
accctgcgctccttacacctggacaacaaccgtctcatagagctgggtcctgatgatctc
cggggcctggtcaacctgcagcacctcatccttaacaacaaccagctgggacgcatctcg
gaccgggccttggaagacctggcaccctccctagaggatctggatctgtcctacaacaac
ctgaggagcctgccctgggactcagtcaagctgatggtctctctccaccagttgagtctt
gaccataacctcctggacttcatccctgaggggacctttactgatctagagagactggct
cgcctggatctcacctccaaccgactgaagaagctgcccccagaccccatcttcgccagg
gcccaggattcagtgatgatgaccactccctatgccccccagctgtcccttggcatcggg
gggaaccccctgcattgtaactgtgaggtgctgtggctgcggcggctggagagggacgat
gatcaggagacatgcgcttccccttccaacctgaaggggcgctacttctggtatgtgagg
gaggaggagtttgtgtgcgagccacccctcatcactcagcacacccacaggatgctggtg
ctggagggccagatggccagcctgaggtgtgaggccattggagaccccacccccaccatc
cactggatggcccctgacgaccgtgtccttggcaactcgtcccgaaccgtcgtctacggc
aacggcaccctggagattctcatcaccacctccaaggactacggtaccttcacctgcatc
gcggccaacgtggccggggagtccaccgcctcagtggatctgtcaatcatccagctgccc
cacctcagcaacggcaccggtcaggcctcacagcccaagtcccgcctctcggacatcacc
ggcaccaccaggataagcaagggggttccaaagacccccccggagaaagtggtcactgtg
tcagaggtgacagccatttcagccttggttaagtggaccgtcagcaaggcagcgcccaag
gtaaagatgtaccagctccagtacaactgttccgatgatgaagtcctcatctacaggatg
atcccggcctccagccaggccttcctggtgaccaacctggtgtcggggaccaagtacgac
ttgtgtgtcctggccgcctgggacgacaccgccaccaccctgacggccaccaacgtggtg
ggctgtgcccagttcttcacccgcgatgactacacacagtgccagtctctccacagccag
tttctggggggcaccatgatcctggtggtgggtggcatcatcgtggcgacgctactcatc
ttcatcgttatcctgatggtacgctacaaggccaccgaccatgaggggggtggcatcggg
gggagcggcaagctgaccagcgtaagtgacacccactcacagaccaatgggggccggctg
ggacagaacggcgtgccccttcccctgcccaaaccaaaggccaaagtgaccctccaggat
gaggtggtggagtttaaatgtggttccctccagagcacctcgtcctcatcctcgtcgggg
ggctcggtggtcggggagggttcctacagccccaacagcaccctggccattatgtggagg
caggctgccccctctaagcccagggcaaacctggatcacctgctgggggccttcaactcc
ctagagctccggggggcccagggcaggggagacctgggggagccctcatccagcagtagt
accccggtggcgggtggcgataggccccacacggacagggagcccctgctgggccggaca
atggactcgcggctgagccggttgctcatgctgtctcatgactccaaaccaaaaaggagc
cagtcgtttgacatgggggactgtatggatacagatcaacaaacagaccaagcgatggcc
tctagcacctccactgccacaacgccggtgtgcagttacccgcggcgcatcagcaacatc
tggactaagaggagcctgtctgtgaacggcatgctgctacagtgtgacgaggaaggggat
atgggggggagcaaggggaccttcgacagccaagagtgggtcatggagagtactgtctag
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