Oncorhynchus tshawytscha (Chinook salmon): 112217939
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Entry
112217939 CDS
T05605
Name
(RefSeq) tubulin alpha chain-like isoform X1
KO
K07374
tubulin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04210
Apoptosis
otw04530
Tight junction
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112217939
09143 Cell growth and death
04210 Apoptosis
112217939
09144 Cellular community - eukaryotes
04530 Tight junction
112217939
04540 Gap junction
112217939
09142 Cell motility
04814 Motor proteins
112217939
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112217939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112217939
03036 Chromosome and associated proteins [BR:
otw03036
]
112217939
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112217939
04147 Exosome [BR:
otw04147
]
112217939
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112217939
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112217939
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112217939
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112217939
Exosomal proteins of other body fluids (saliva and urine)
112217939
Exosomal proteins of colorectal cancer cells
112217939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
112217939
NCBI-ProteinID:
XP_042174102
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MDFSSLALGVHNCTAGFIGERLPPLIEDRRECISMHVGQAGAQMGNACWELYCLEHGIQP
DGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQL
ITGKEDAANNYARGHYTIGKEIIDLVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSL
LMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI
CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATY
APVISAEKAYHEQLSVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAI
ATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSIGEEDEEGEEY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcctctctagcactgggagttcataactgcactgctggtttcattggagaa
cgactgccccctctcattgaagacaggcgtgagtgtatttctatgcatgtcggccaggcc
ggagcccagatgggcaatgcatgctgggaattgtactgcctggaacatgggatccagcct
gatggacagatgcccagtgataagacaatcggagggggagatgactccttcaacaccttc
ttcagtgagactggagctggtaaacacgttcctcgtgcagtttttgtagacctggagcca
accgtcatcgacgaggtccgcacaggtacctaccgccagctgttccaccctgagcagctg
atcacaggcaaggaggacgctgccaacaactatgcccgtggtcactacaccattggcaag
gagatcatcgacctggtactcgataggactcgcaaactggctgaccagtgcactgggctc
cagggcttcctgatcttccacagctttggaggaggcaccggctctgggttcacctccctg
ctgatggaacgtctctctgtcgactatgggaagaagtccaagcttgaatttgctgtttac
ccagctccccaagtttctactgctgtggtggagccttacaactccattctgactacccac
accaccctggagcactcggactgtgccttcatggtggacaatgaggccatctatgatatc
tgccgcaggaacctggacattgagcgccccacctacaccaacctcaacaggctgattggt
cagatcgtctcctccatcaccgcctccctgcgtttcgatggagccctcaatgtggacctg
acagagttccagaccaacttggtgccttatccccgtatccacttccctctggccacctat
gctccagtcatctctgctgagaaggcctaccatgagcagttgtctgttgctgacatcacc
aacgcctgctttgagccagccaatcagatggtgaaatgtgacccacgtcacggcaagtac
atggcctgctgcctgctctaccgtggtgatgttgtgcccaaagatgtcaactctgccatc
gcaaccatcaagaccaagcgcaccatccagtttgtggactggtgtcccactggcttcaag
gtcggtatcaactaccagccacccacagtggtccctggaggagatctggccaaggtccag
agagctgtgtgcatgctgagcaacaccaccgccatcgctgaggcctgggccaggcttgac
cacaagtttgacctgatgtacgccaagagagcctttgtgcactggtatgtgggagagggc
atggaggagggagagttctcagaggccagagaagacatggcagccctggagaaggattat
gaagaggtgggtactgacagcatcggagaagaggatgaagaaggagaagagtactaa
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