Oncorhynchus tshawytscha (Chinook salmon): 112217987
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Entry
112217987 CDS
T05605
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03266
Virion - Herpesvirus
otw04514
Cell adhesion molecule (CAM) interaction
otw04517
IgSF CAM signaling
otw04520
Adherens junction
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
112217987
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112217987
04517 IgSF CAM signaling
112217987
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112217987
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112217987
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112217987
04090 CD molecules [BR:
otw04090
]
112217987
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Nectin family
112217987
CD molecules [BR:
otw04090
]
Proteins
112217987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
I-set
ig
Ig_PVRIG
TM_ErbB1
C2-set_3
DUF4786
Motif
Other DBs
NCBI-GeneID:
112217987
NCBI-ProteinID:
XP_042153716
UniProt:
A0AAZ3SK74
LinkDB
All DBs
Position
LG14:complement(61075533..61402229)
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AA seq
499 aa
AA seq
DB search
MAMLATVWIVLLAVNIQAGDGQSVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQK
FLNGTKQNVAIANPSLGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIMFSNLRLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPLTRMTLTTPTIVARPQKRKMTVATCLSANGKPQSVI
KWDTRLKGEATFQETQNANGTVTVRSNYVVVPSRETHKQKLTCIVTYRNERITDSVVLNV
QYEPEVKIEGFDGNWYLNRQDVSLTCNTDANPPVTVYQWKLLNGSLPSTVEIRNNSLIFK
GAVTYELAGTYVCDATNGIGTRTGLVEVNITEFPNNPPPGGREIPQEQHNAGAVIGGAVG
GVVLLAAAATLLFVFLRRRQRTFKGDYSTKKQVFGNGYSKAGGLPAHPPIPNNLQYPDDS
DDEKKPAQIAVTGGFEASERDFDRDAEDLKRPYFTVDEGESQDYDERTLAFQYNPGPDVA
DDMVSQTDGSVISKKEWYV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttggcgactgtttggatagtccttctggctgtcaatatacaagctggagat
ggacagagtgtccagatggactccattaagtcaggcttcgtgggctcccaggtggagctg
cggtgtatcttcgttaattccaaccctccagtcaagatctctcaggtgacgtggcagaag
ttcctgaacggcaccaaacagaacgtggccatcgccaacccgtcgctgggggtgtccgtg
ctcccgcccttcaaggagagggtgaccttcaagcaggctgcggtccgccaccgcaccccg
tctctggaggataccaccatcatgttctccaacctgaggctgtctgatgaggccgcatac
atctgcgagtacaccaccttccctgctgggaaccgagagaacatggtcaacctcaccgtg
tttgcgcgacctctgacccgaatgaccttgaccacgcctaccatcgtggcccgcccccag
aagcgtaagatgactgtggcgacatgcctctcagccaatgggaagcctcagagtgtgatc
aagtgggacacaaggctgaagggtgaggccacgttccaggagacgcagaatgccaacggc
acggtgaccgtccgcagtaactatgtggtcgtgccgagcagagagacacacaaacagaaa
ctcacctgcatcgtaacctaccgcaacgagaggattaccgacagtgtcgtgctcaacgtg
cagtatgaaccggaggtgaagatcgagggttttgatggtaactggtacctgaaccgtcag
gacgtcagcctcacctgcaacactgacgctaacccccctgtcaccgtctaccagtggaaa
ctgttgaatggatctcttcccagcaccgtggagattcgtaacaactctctaatcttcaag
ggggcggtgacctacgagctagctggaacatacgtgtgtgatgccaccaatgggatcggg
actcgtacaggtctggtcgaggttaacatcactgaattccctaacaacccaccacctggg
ggccgtgagatcccgcaggagcagcacaatgcgggtgccgtcatcgggggcgccgtgggc
ggggtcgtcctgttagcggcggccgccaccctgctctttgtgttcctgcgccgccgccag
cgcaccttcaagggcgactacagcaccaagaaacaggtgtttgggaacggctacagcaag
gccgggggcctgccagcccaccctcccatccccaacaacctgcagtacccagacgactca
gatgacgagaagaagcctgcccagatcgctgtgaccggagggttcgaggcgagcgagcgt
gattttgacagagacgcggaggacttgaagaggccctatttcacagtggacgaaggagag
agtcaagattatgatgaacggactctcgctttccagtacaaccccgggccggatgtagcc
gatgatatggtgtcccaaaccgatggctctgtcatttcaaagaaagagtggtatgtgtag
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