Oncorhynchus tshawytscha (Chinook salmon): 112218009
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Entry
112218009 CDS
T05605
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
otw01100
Metabolic pathways
Module
otw_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
112218009
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112218009
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
112218009
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
112218009
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112218009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
ADIP
MscS_porin
HH_AprE
EXOC6_Sec15_N
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
112218009
NCBI-ProteinID:
XP_042156465
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All DBs
Position
LG18:complement(34267758..34310325)
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AA seq
902 aa
AA seq
DB search
MMQRNGGGVGAGGQPWVLRRVRLTWLSFMLFFILVFFPLIAHYYLTTIDEAGGPDKRIFG
PRPGGELCEAKHVQDLCRIRESVSEELLQLEAKRQELNGEIVRLNLRIEACKRSIDSAKQ
DLLQLKNVISQTEHSYKELMAQNQPKLSLPVRLLPDKDDPGLPPPKSAHVCRLRSCFDYA
RCPMTSGFPVYVYDTASYPWGESLDPLVRQAFATSVRSSIYVTDNPSIACLYVVLVGELQ
ESPSSPLPVPSALEKQLKALPYWRSDGHNHLLVHLSRKSMTQNFLYNVSTGRAAVAQSTF
LQQQYREGFDLVVSPLVHALSEPNFLEVPPQVPVKRKYLFTFQGERVESLRSSLQEGPPQ
SFEEEMEGDPPADYDDRIIGTLKAVQDSRLDRVLVEFTCKSPQPSLPTEWALCGEREERL
EILKASTFALVISPGDSQLMASAGNGMRLFEALEVGAIPVVLGDHARLPYHQLVHWSEAA
IMVPKPRITELHFLLRSLSDNDLLAMRRQGRFLWETYFSTSENVLGTILASVRTRIQVPP
APIHEEPAQEIPHKAGKMAGTDANMGDNGDLDLGPVETEPPYASPRFLRNFTYTASDTYQ
TWNRAPGPFHLFPHTPLDPVLPSEAKFLGSGTGFRPIGSGTGGSGKEFQAALGGNVPREQ
FTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSDDLLWPDIGLPIVVVRTEK
NSLNNRFLPWDVVETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRFHAWDVNH
QSWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSH
ITRKPPIKPPFHRHSYPERHKCINFFVKVYGYMPLLYTQFRVDSVLFKTRLPHDKTKCFK
FI
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcgtaacggtggcggggtgggggctggtggccagccgtgggtgctgcggcgc
gtgcgcctcacctggctcagcttcatgctcttcttcatcctggtcttcttcccgctcatt
gcccattactacctcaccaccatcgacgaggcaggcggccccgacaagcgcatcttcggc
cctcggcccggcggtgagctgtgcgaagccaagcacgtgcaggacctgtgccgcatccgc
gagtcggttagcgaggagctgcttcagctggaggccaagcggcaggagctgaacggggag
atcgtccgactcaacctgcgtatcgaagcgtgcaagcgtagcatcgacagtgccaagcag
gacctgctgcagttgaagaacgtcatcagccagacggagcactcatacaaggagctgatg
gcccagaaccagcccaagctctcgcttcccgtgaggttattacctgacaaggacgaccca
ggactacccccgcccaagtctgcccacgtctgccgcctgcgctcctgcttcgactacgcc
cgctgcccgatgacctcgggcttccctgtgtacgtctacgacacagcctcctacccctgg
ggtgagtccctggacccgctggtcaggcaggccttcgccacctcggtgaggagcagcatc
tatgtgacggacaaccccagcatcgcctgtctgtatgtggtgctggtgggggagctgcag
gagtctccttcctcccccctcccggtcccctcagcgctggagaagcagctgaaggctttg
ccgtactggaggtctgacggacacaaccatctcctggtccacctttccaggaagtccatg
acacagaacttcctgtacaatgtgagcacgggccgggcggcagtggcccagtccaccttt
cttcagcagcagtaccgcgagggctttgacctggtggtgtctccactggtccacgccctc
tctgagcccaacttcctggaggtgccgccccaggtacccgtcaagaggaagtacctgttt
accttccagggcgagagggtggagtctctgaggagcagcctgcaggaggggccacctcag
tcctttgaggaggagatggagggagacccgccagccgactacgacgatcgcatcatcgga
acgcttaaggcagtgcaggacagccgcctggatcgggtgctggtggagttcacctgtaag
agcccgcagcccagcctgcccacagagtgggccctgtgtggggagagggaggagcggcta
gagatccttaaggcctccacctttgccttggtcatctcccccggggacagtcaactgatg
gcctcagcgggcaacggcatgaggctgtttgaggccctggaggtgggggccatccctgtg
gtactgggggaccatgccaggctgccctaccatcagctggtccactggagcgaggcggcc
attatggtgcccaagccccgcatcaccgagctgcacttcctgctacgcagcctatcagac
aatgacctgctggccatgcggcggcagggccgcttcctgtgggaaacctacttctctacc
tcagagaacgtcctgggcacaattctggctagcgtccggacccgcatccaggtgcccccc
gcgcccatccacgaggaacctgcccaggagatcccccacaaggcgggcaagatggcgggc
acggacgctaacatgggcgacaatggcgacctggacctgggtcccgtggagacggagcca
ccctacgcctcaccacgcttccttcgaaacttcacctacacagcatccgacacctaccag
acctggaaccgcgccccggggcctttccacctcttccctcacacgccgctggacccggtg
ctgccctcggaggccaagttcctgggttcgggcacgggcttccgccccattggcagtggc
acgggtggctcggggaaggagtttcaggcagcgctgggtgggaacgtgccccgggagcag
ttcaccgtggtcatgctgacctatgagagggaggaggttctgatgaactccctggagagg
ctcaacgggctgccttacctcaacaaggtggtggtggtgtggaactcccccaagcctcct
tcagatgacctgctgtggccagacatcggcctacccatcgtggtggtgcgcacggagaag
aacagcctcaacaaccggttcctgccctgggacgtcgtggagacggaagccatcttgtcc
atcgacgacgacgcccacctccgccacgacgagatcatgtttgggttcagagtgtggagg
gaggccagggaccgcatcgtgggcttccctgggaggttccatgcctgggatgtcaaccac
cagtcatggctctataactctaactactcctgtgaactgtccatggtactgactggcgcc
gccttctttcacaagtactatgcgtacctgtactcgtacgttatgccccaggccatccgc
gacatggtggatgagtacatcaactgtgaggacatcgccatgaacttcctggtgtcgcat
atcacccgcaagccccctatcaagcctcccttccacagacactcttatccagagcgccac
aagtgcatcaacttctttgtcaaggtgtatggctacatgcccttactctacacgcagttc
cgcgtggactctgtgctcttcaagacgcgcctgccccacgacaagactaagtgcttcaag
ttcatctag
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