Oncorhynchus tshawytscha (Chinook salmon): 112218055
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Entry
112218055 CDS
T05605
Name
(RefSeq) claudin-20-like
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112218055
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112218055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112218055
04147 Exosome [BR:
otw04147
]
112218055
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112218055
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112218055
Exosomal proteins of colorectal cancer cells
112218055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
112218055
NCBI-ProteinID:
XP_024234422
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All DBs
Position
LG18:complement(10088023..10091469)
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AA seq
313 aa
AA seq
DB search
MASSAMQILAFALALLGVLGATVATLLPNWKVSADVGSNIMTAISQMQGLWMDCTWYSTG
VFSCTLKYSVLSLPAYLQTARTTMVLSCMMACLGLCLAALGLKCTRWGGSHRAKGHAAIG
AGGCFILAGILCLVPASWFTNEVITTFLDSNIPESSKYEPGGAVYVTFVSAGLLLAGGVI
FCLSCPGKREGQLDYTSTSTSTTFPDKLLQQQINQEQIQRDQLQRDLILREQLQRGQKDF
EQQTSPNEQSSREQLQWGDKGPQDEAHEADEIQQEEPLQEKPLHEDKGTQQFYSPSRVPP
KDARAGYSLQDYV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgccatgcagatcctcgcctttgccctggcgctactgggcgtcctgggc
gccactgtggccacgctgctgcccaactggaaggtgagtgccgacgtgggctccaacatc
atgactgccatctcccagatgcaggggctgtggatggactgcacctggtacagcaccggc
gtgttcagctgcaccttgaagtactccgtgctgtcgctgcccgcctacctgcagaccgcc
cggacgacaatggttctgtcgtgcatgatggcttgccttggcctctgtctcgctgccctg
gggctcaaatgtacccgctgggggggcagtcaccgggcaaagggacacgcagccatcggg
gcggggggttgcttcatcttggctggcatcctctgcttggtgcccgcttcctggttcacc
aacgaggtaatcactaccttcctggactccaacatacccgagagcagtaaatacgaacct
gggggggccgtgtacgtgacctttgtctctgccggcctactgctggccggtggggtcatc
ttttgtttgtcgtgtcccgggaaaagagaggggcagttggattatacgtcgacatccacc
tctaccacctttcctgacaaactactgcagcagcagataaaccaggagcaaatacagcgc
gaccagctccagcgtgacctgatactgcgggagcaactgcaacgggggcagaaggacttt
gaacagcagacgtcgcctaatgagcagtcaagccgtgagcagcttcaatggggtgacaaa
gggccccaggatgaggcccacgaagcggacgaaatccagcaggaggagcctctacaggag
aagcctctacatgaagacaagggaacgcaacagttctactctccatccagagtccctcca
aaagacgcccgggcaggctacagcctgcaggactatgtttaa
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integrated database retrieval system
