Oncorhynchus tshawytscha (Chinook salmon): 112218104
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Entry
112218104 CDS
T05605
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112218104 (ap5b1)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
112218104 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
112218104
NCBI-ProteinID:
XP_024234472
UniProt:
A0A8C8D5W1
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All DBs
Position
LG02:complement(31401280..31405107)
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AA seq
964 aa
AA seq
DB search
MSANWPERISAFLSSPSQFLYSTTSDIFLAEVLHELRDDRASDHIKVLLLSPLLEHPTLL
CPSVFVGEETALELMSVFAQCSPKSLPLRCHLLLALTSVLLCSCCVSSHTSASQDFLDLL
LQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQRLELLSSLRQQENSRLHQAY
TGLHALALRNAVYLLTQQKGAGAGDLKTALGSNEGFVWGEGADSAHPNSESHSDLALFSP
LTLGTMGKVPSLQTGLDCKELRSLLSSLLEESYLLTSLSQAALLRRLVEVLAMVPAVSPT
IFRAQLLRLLGTCKVCLLHTTLLMKAAFTDSLFSAEDEAFLLKRLVGLSQHPLLSTPEKL
FYMDCILHFPENRPISSGDESLPVLLTPRLATALVPTVFNDSVSMLARLNLLSLVYLEEG
EEDREGQGGRGLAYLYDHLSSLLRIVENQASREMVVTFFRASFLFLLHFCHVERYSEDLS
QRLCDLYLRRTRLAPHLINLADRTQDRLEESGWAVALLRALQRTITEAPLSQLTLQDLRW
HLRILARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDWRLGNSVLGVCRRLLLHPSLD
SLLTPLADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEKLAGVLAQRGTERGRQAKVRS
LSAIMGENEELTSGLTVHQTERPLLRLVKLDKHEPDECRPEHKPDSEPACETESSPGQGG
IEDYRAQFQSSSFASEITLQYHLTHTGVHDPHFDKLFSIRLHFDLTDGHYEEVSDISVPC
LFRTRKPPTVRLRLKPKQPYHTTLRASAIFTTEDGLSWHSPLADLHVAFPEVFLPLLTPL
GWAREKKQRVFEGIWGEICSGQSEGDLTNTATSLFCDQLEDSAVGELVRKYFQRYLVSDL
DKGRCKVLFFLPPQSHVLLKVITEEDAVQVHIATDNWKLLPYINSYLEDITKEIHSTQQV
NGDV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactggcccgagaggatctccgcattcttgagcagcccgtcccagttcttg
tacagcacgacatcggacatcttcctcgctgaggtcctgcacgagctgcgagatgacagg
gccagtgaccacatcaaggtcctgctgttgtccccactacttgagcaccctactctgctg
tgcccctctgtctttgtgggcgaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgctccgctgccaccttctcctggccctcacctccgtgctc
ctctgctcctgctgtgttagttcacacaccagcgcctcccaagacttcctggaccttctc
ttacagatggcccaggacaccaatgacgcacaggctggggctgcattacacccattgagg
acaacagcctgcgactgccttagggagctagaggcttgcctcccgggcctactatcccaa
cgcttggagctcctgagcagcctgaggcagcaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggctctgaggaatgctgtgtatctgctcacccagcagaaaggg
gccggggctggagacctgaagactgcactggggagcaacgaggggtttgtgtggggggag
ggtgcagactccgcacacccgaactctgagtcacactcagacttggccctcttctcgccc
ctcactctgggtaccatgggaaaagttccgtccctgcagacgggcctagactgtaaagag
ctgagatcgctactctcctccctcttagaggagtcctacctcctcacatccctatcccag
gctgccctgctgcgacggctggtggaggtgcttgccatggtgcccgcagtctccccaacg
atattcagggcacagctgctgcgtctattgggcacatgcaaggtgtgtcttcttcatacc
actctgctgatgaaggctgctttcacagacagcctgttcagcgcagaggatgaagccttc
cttctaaagcgtctcgtcggcctgtcccaacaccccctactgagcacacctgagaagctc
ttctacatggactgcatcctgcacttcccagagaaccgacctatcagtagtggcgacgag
agcctgcccgtgctcttgacccctcggctggccacagccctagtgcccacagtgttcaat
gatagtgtcagcatgctggctagactgaacctactctctctggtctacctggaggaagga
gaagaagacagggagggacagggggggagaggcctggcctacctgtatgatcacctaagc
tcccttctccgtatcgtggagaaccaggccagtagggagatggtggtgaccttcttcagg
gcttccttcctcttcctccttcacttctgccacgtggagcgctactctgaggacctgtct
cagaggctgtgtgacctgtacctcagacgcactcggctggcccctcacctcatcaacctg
gctgaccggacccaggaccggctggaggagtcaggctgggctgtggcactgcttagagcc
ctgcaaagaaccatcacagaggccccgctatcccagctcaccttgcaagacctccgctgg
cacctcaggatcctggcccgcgtggcagaggaaggggaagtcctccagagggccactctc
aactttctgctgtgcgtcatcacttcctcttcatctgcgctgtgtgtgagcggggactgg
cgtctggggaacagcgtgctgggggtgtgtcgacgcctgctcctgcaccccagcttagac
tcccttctcacaccgctggctgatctcctacagcacctcacctgccattatggtgaaaca
gacatccaggaccacgcccgcttgtactacaccctcctcaccactctttcccaggagaag
ctggctggggtgttggcacagaggggaacagaaagggggcggcaggccaaagtgcgctcg
ctgtctgccatcatgggcgagaacgaggaactgaccagcggtctgaccgtgcaccagaca
gagcgaccgctgctgaggctggtcaaactggacaaacatgaaccagatgaatgcagacca
gagcataaaccagacagtgaaccagcctgtgagactgagagttccccaggacagggtggg
atagaggactacagagcccagttccagagttccagcttcgcctctgaaatcaccctccaa
taccacctcacacacactggagttcacgacccccatttcgacaagctcttcagcatccgc
ttgcactttgatctcacagacggccactatgaggaagtgagtgacatcagcgtgccttgc
ctgttcaggaccaggaagccccctacagtgaggctgaggctgaagcccaagcagccgtac
cacaccaccctgagagctagcgccatcttcaccacggaggatggcctctcctggcactcc
ccgctggcagacctacatgtggccttccctgaggtgtttctgcccctcctcacaccccta
gggtgggccagggaaaagaagcagagggtgtttgaggggatctggggtgaaatatgctca
gggcagtctgagggggatttgaccaacactgcaactagcctgttctgtgatcagttggag
gattcggctgtgggtgagctggtgaggaagtactttcagagatatctggtctcagacttg
gataaaggcaggtgtaaagtgctcttcttcctcccaccccagtctcacgtgctgctgaag
gttatcacggaggaggatgccgtccaggttcatattgctacagacaactggaagcttctg
ccttatattaactcttatctagaggacattaccaaagagattcacagcacacagcaagtc
aatggtgatgtctga
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