Oncorhynchus tshawytscha (Chinook salmon): 112218129
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Entry
112218129 CDS
T05605
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112218129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112218129
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
112218129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
DGOK
Motif
Other DBs
NCBI-GeneID:
112218129
NCBI-ProteinID:
XP_042171191
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MTGIHVEGLAAIALFYVLILAVGIWAAWKNKHAGEAEGTDRSETIMVGGRDIGLFVGGFT
MTATWVGGGYINGTAEYVYLPGYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDP
FQQKYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIIDINIKMSVVISACIAIFYTL
VGGLYSVAYTDVVQLFCIFLGLWVSVPFALNNPAVSDIKISAVKEIYQAPWKGNIKREDT
WVWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFIAAAGCLVMAVPSVMIGAIGAS
TDWNQTAYGPVPPKERDQADMILPIVLQYLCPPFVSFFGLGAVSAAVMSSADSSILSASS
MFARNIYQLAFRQSASDTEIVWVMRVTIFVFGGLATAMALLTGTVYGLWYLSSDLVYVII
FPQLISVLFVKGTNTYGSVAAYVFGLILRIGGGEPYLSLPPFIYYPGWQIEDRIHHLTGE
VEHIVVQKFPFKTVSMLASFLGNVAFSYLAKYLFESGKLLPKYDFLDAVLAQHSIENMDK
TTLVNRNTIVLSEMAAVKPRLSVQLAATFTRRDTLAEEDSSPEDSPNHETLD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtatccacgtggagggactggcggcgatcgccctcttctacgttctgatcctt
gcggtggggatctgggcagcgtggaagaacaaacacgccggggaggcggagggcacagac
cgcagtgaaaccatcatggttggtggaagggacattggtttatttgttggtggttttacc
atgaccgcgacctgggttggtggcggatacataaacggaacggcggagtacgtctatctt
cctgggtacggcttggcttgggcacaagcgccttttggatatgcgctaagtctagtcgta
ggaggtctgttcttcgccaagcccatgcgctccagaggttatgtcaccatgctggaccct
ttccagcagaagtatgggaagaggatgggtggtctgctcttcatacctgctctaatggga
gagatcttctggtcggcggccattttatctgctctgggagccacgctgagtgtgatcata
gacataaacatcaagatgtctgtggtgatctctgcctgtattgcgatcttctacacgtta
gtcggaggtctgtattctgtagcctacaccgacgtggtgcaactcttctgtatcttcctg
ggactgtgggtttcagtgccgttcgctctcaacaacccagcggtgtctgacatcaagatc
agtgcagtgaaggagatctaccaagctccctggaagggaaacatcaagagagaagacacc
tgggtctggatagacaacttctgtctgctgatgttgggggggattccctggcaggtatat
tttcaacgggttctctctgcctcttcagctacgtacgcccaggtgctctcgttcatcgcc
gctgcagggtgcctggtcatggccgtgccctcagtaatgatcggggctataggggcctcc
acagactggaaccagacggcgtatggacctgtacctcccaaggagagggaccaggcagac
atgatattacccatagtcctccagtacctctgtcctcccttcgtctccttcttcggcctg
ggggcggtctctgctgccgtgatgtcatccgccgactcctccatcctatcagctagctcc
atgttcgctcggaacatctaccagctggctttccgccaatctgcatcggacaccgagatc
gtgtgggtgatgcgtgtcaccatctttgtgttcggcggcctggccacggcgatggcgttg
ctaacggggacggtgtacgggctgtggtacctgagctccgacctggtctacgttatcatc
ttccctcagctcatctccgttctcttcgtcaagggaaccaacacgtacggctctgttgcc
gcttacgtctttggtctgatcctgagaatcggaggaggggaaccctacctctcactaccc
cccttcatctactaccccggctggcagatagaggaccggatccatcatctgactggagag
gtggaacacatcgtggtgcagaagttcccgtttaagaccgtctccatgttggcctccttc
ctgggcaacgtggctttctcctacctggccaagtatctgtttgagagcggcaagttgttg
cccaagtatgacttcctggacgcggtgttggcccagcacagcatagagaacatggacaag
accacgttggtcaaccgtaacaccatcgtgctgtctgagatggcggctgtcaaaccaagg
ctcagcgttcaactggcggctacgttcacccgcagagacactctggctgaggaggactcg
agtcccgaagacagccccaaccacgagaccctggactaa
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