Oncorhynchus tshawytscha (Chinook salmon): 112218130
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Entry
112218130 CDS
T05605
Symbol
ino80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112218130 (ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112218130 (ino80)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
112218130 (ino80)
INO80 complex (yeast)
112218130 (ino80)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
112218130
NCBI-ProteinID:
XP_042156951
LinkDB
All DBs
Position
LG18:38984086..39089055
Genome browser
AA seq
1582 aa
AA seq
DB search
MASGAGQAEAGDGAAWSSSGLAKPLHLQHLERSLRLDSFLRQTASVFNRDLSSDDSDDGG
LGEGPSLRPVNQHAALAIKEESCDLDEEGLVTEGTILNGTPSQEHKEDKASLYNFSKLKK
SRKWLKSILLSDDTSESDTEDSDFSLSREELQDMLRLHQFTREHQNKFHNDRELQQYQYY
STGLLSSHDPFHEQQRHLLGPKKKKIKEEKKFKGKLKKGKRKKKRGEGEFSGEGRPHVTK
IFAKFSHDAPLPMLKKKHLTVEQLNARRRKVWLTIAKKECPKAFKQKASAKNFVLTNAKK
LAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMTLYWKKYEKVEKEHRKRAEKEALEQR
KLDEELREAKRQQRKLNFLITQTELYAHFMGGKGPGEEDGGEEDILNKLDDTNSHRQMTI
GGGLTVNVGQEDYDSEYYKSQALRKAKEAYEIHQARTRLFDEEAKDSRCASLHQASGGSG
SGFGESYSLSNPSIQAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLG
KTVQSIALLGHLAERDNIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVI
RKFWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKIL
LQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAID
ENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTCRQRLLYRALRNKISIEDLL
QSSMGSSQQAHSTTSSLMNLVMQFRKVCNHPDLFERQETRSPFHMSLRPYVMSKFLYRHG
LTHTTTHTHSRNKVLQVLLSPFSPDHIHQSLFHRKGDQAGSCFSFLRFIDVSPAEMFNVM
LQGTLVRWLALFLSLKAAYRLYQRRMWGLEEEEGGGRIGGEEEGSGRPRSQCLSRRGLIL
WLDRPTAFPNTHTSTVLQNLVFTRHSPGLMGHCDVLVHSRCSANSTTLRPGQPTQPPKFL
LTAVPRVTAVPMERYCDDRSAEYEWQETRAGGGMAAKHCFLYGSLDLASDWMSRANTFYP
RCPGGVMALYPRHGWSYIRIPDKETLITDSGKLHTLDLLLCRLKTQGHRVLIYSQMTRMI
DLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADT
VIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICQLTIEERILQRAKEKSEIQRMVIS
GGNFKPDTLKPKEVVSLLLDDEELEKRLRVRQEEKTQQEECSKVKDRRRKREKYADKRKK
DDEDPKDPKRRKDVNLVIPYNLSADNSNLSADGDDSFISVDMDDSAMPSPFSEISLSSEL
QPSSLPPDQDPDQDPDPDQDESSSDMLVIVDDPVSSAPQSRATNSPVSVSGSMSDNMNGV
SNQDTSSPGRGRSGRSRGRPKGSGSSSGGGAKSAGKGRVRKSTAGSAAAMAGAMAGAAAA
SAAYGYSVTKAGLPAASPLQPSLGRSGTAPAFSPSRSSSPKGKGGTVAPSQSNPQQKQPG
HSHHHSHVTGRKGKGPGAPGTR
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggggctgggcaggcagaagccggcgatggggcagcatggtcgtcatcaggc
ctggccaagcctcttcaccttcagcacctggagagatccctacgccttgacagcttcctc
cgccagaccgcctcagtcttcaacagagacctatccagtgatgacagcgacgatggcgga
ttaggggaggggccttctctgaggccggtcaatcagcacgcagccttggcgataaaagag
gagtcatgtgacctggatgaggaggggcttgttaccgagggcaccatcctcaacggaact
ccatcacaagaacacaaggaagacaaagccagtctatacaacttctccaaactgaagaag
agcaggaaatggctcaagagtatcctgttgagcgacgacaccagtgagtcagacacagag
gactctgacttcagtctgtccagagaagagctacaggacatgctcagactacaccagttc
accagggagcaccagaacaagttccacaacgacagagagctgcagcagtatcagtactat
agtacgggactgctctcctcccatgaccctttccacgaacaacagcgccacctgctgggc
cccaagaagaagaagatcaaggaggagaagaaattcaagggcaagttgaagaagggcaaa
aggaaaaagaagagaggggagggggagttctcaggcgaggggcggccgcatgtcaccaag
atcttcgccaagttttcccatgacgcccctcttcccatgttgaagaagaaacacctgacc
gtagagcagctgaacgcacgacgacgcaaagtctggctcaccatcgccaagaaggagtgt
cccaaggccttcaagcaaaaagcatcagccaagaacttcgtccttaccaatgccaaaaag
ctggcccaccagtgtatgcgtgaggtacgtagggcagccatccaagcccagaagaactgt
aaagaaacccttccccgggccaggagactgaccaaggagatgactctctactggaagaaa
tatgagaaggtggagaaggaacacaggaagagagcagagaaagaggctctggagcaacgc
aaactggacgaggagctgagagaggcgaagcgtcagcagcgtaagctgaacttcctgatc
acccagacagagctgtacgcccacttcatggggggcaagggtcccggggaggaggatggg
ggagaggaggacattctcaacaagctggacgacaccaactctcacaggcagatgaccatc
gggggagggctgacggtcaacgttggacaggaggactatgatagtgaatactacaagtct
caggccttaaggaaagctaaagaagcctacgagatacaccaggccagaacacgtctcttt
gacgaggaggctaaggacagtcgctgtgcctccctgcaccaggccagtggggggtcgggg
tcagggttcggggagagctacagcctgtctaacccttctatccaggccggagaggacatc
ccccagccaaccatcttcaacgggaaattgaagggataccagctgaaaggcatgaactgg
ctggctaacctctacgaacagggtatcaatggtatcctagcagatgagatgggcctgggg
aagactgtccagagcattgctctgctgggtcacctggctgagcgggacaacatctggggt
ccgttcctcatcatctctcctgcctccacactgaataactggcaccaggagtttacacgc
tttgtccccaaattcaaggttctgccgtactgggggaaccctcacgaccgcaaagtgatc
aggaagttctggagccagaaaaccctgtacacccagaatgctccgttccacgtggtgatc
accagttaccagctggtagttcaggatgtcaagtacttccaaagggtcaagtggcagtac
atggttctagatgaagcccaggccctaaagagcagcaccagtgttcgttggaagatcttg
ctgcagtttcagtgtagaaacagactgttgctcactggaacgcccatacagaacactatg
gcagagttatgggccctgctccatttcatcatgcctacgttgtttgactctcacgaggag
tttaatgaatggttctctaaagacatcgagagccatgcagagaacaagtctgccatcgac
gagaatcagctgtccaggctccatatgatcctgaaacccttcatgttgaggaggatcaag
aaggacgtcgagaacgagctctctgacaagattgagatcctaacatactgccagttgacg
tgtagacagaggctgctctacagagctctgaggaacaagatctccatcgaggatcttctc
cagtcgtctatgggctcatctcagcaggctcacagtactacctcatcccttatgaacctg
gtcatgcagttcagaaaggtctgtaaccacccggacctgtttgagcgccaggagactcgt
tctcccttccacatgtcactgagaccctacgtcatgtccaagttcctctaccgccacgga
ctcacacacaccaccacgcacacacacagcaggaacaaggtgctccaggttctactgtct
cccttctctcctgatcatatccaccagtccctcttccacaggaaaggtgatcaggcagga
agttgtttctccttcctgcgtttcattgacgtttcgccggcagagatgtttaacgtcatg
ctgcagggcactctggtcaggtggttagctctgtttctctccctgaaggcagcgtaccgg
ctctaccagagacgcatgtggggcctggaagaggaggagggtggagggaggataggagga
gaggaggaagggagcgggaggcccaggagtcagtgtctctctcggaggggtctgatcctc
tggctggaccgacctactgctttccccaacacacacacaagcacagtgttacagaacctg
gtattcacccgtcacagcccaggtctgatgggtcactgtgatgttctggtccacagtcga
tgctctgccaactccaccaccttacgaccgggccaacccacacaaccacccaagttcctg
ctcaccgctgtgccaagggttacggcggttcccatggagcggtactgtgacgaccgcagc
gctgagtacgagtggcaggagacgagggccggagggggcatggccgccaagcactgcttc
ctgtacggctcccttgatctggcctctgattggatgtcccgagccaacactttctaccca
cgatgccctgggggagtgatggcgctctacccccggcatggctggtcctacatcagaata
ccagacaaggagaccctgatcacggacagtgggaagctgcacactctggacctgctgctg
tgccgcctgaagactcagggacaccgcgtcctcatctactcccagatgactcgcatgatc
gacctgctggaggagtacatggtgtatcgtaaacacacctacatgcgtctggacggctcc
tccaagatctcagaacgcagagacatggtggctgacttccagagcaggactgacatcttt
gtgttcctcctgagtacgagggctggaggtctgggcatcaacctgactgctgctgacact
gtgatcttctatgacagtgactggaaccctacagtggaccagcaggctatggacagagct
caccgcctgggtcagaccaagcaggtcactgtgtaccgtctgatctgtcagctcactata
gaggagaggatactgcagagggccaaggagaagagtgagatccagaggatggtgatctct
ggggggaactttaaaccagacaccctgaagcctaaagaggtggtcagtctgctgctggac
gatgaggagctggagaagagactgcgcgttcgtcaggaagagaagacacaacaggaggag
tgcagcaaggtgaaggaccgcaggagaaagagagagaaatacgctgacaagagaaagaag
gatgacgaggaccctaaggatcctaagaggaggaaagacgtgaacctggtcatcccttac
aacctctctgcagacaactctaacctctcagccgacggagatgattcattcatcagtgta
gacatggacgactctgccatgcctagtcccttcagtgagatctctctgagtagtgagctc
cagcccagctccctacctccagaccaggacccagaccaggacccagatccagaccaggat
gagagcagtagtgacatgctagtcatcgtagacgaccctgtgtcttcagcaccacagtcc
agggccaccaactcgcctgtcagcgtgtccggatctatgtcggacaacatgaacggtgtg
tctaatcaggacacgtccagcccggggcggggaaggtctggtaggagccgaggacgaccc
aaaggctctgggtccagttctggaggcggagccaagtctgcagggaaggggcgtgtcagg
aagtcgacagcgggcagcgcagccgccatggcaggagcgatggccggagctgcagcagcc
tcagcagcctacggatacagtgtgactaaagcgggtctccctgcagcctccccccttcag
ccgtctctgggtcggtcagggacggccccagccttctcccccagcagaagttcctctccc
aagggtaaaggtggcactgtggcccccagccagagtaacccccagcagaaacaaccagga
catagccaccaccacagtcatgtgacaggaaggaagggcaagggacctggcgcacctggc
actcgatag
DBGET
integrated database retrieval system
