Oncorhynchus tshawytscha (Chinook salmon): 112218158
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Entry
112218158 CDS
T05605
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X2
KO
K16573
gamma-tubulin complex component 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112218158 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112218158 (tubgcp6)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
112218158 (tubgcp6)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
112218158 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
112218158
NCBI-ProteinID:
XP_024234496
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All DBs
Position
LG19:19447027..19478390
Genome browser
AA seq
1951 aa
AA seq
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MYSSPDVCLKSGSHNSSSNSNSITELLGSLCDSSLTGVSWKRRALGGVSREGVRRTLRKR
AYGALLSKLFQEGSPKGFLSVPSATSTTPPRNKLLMISFDLRVAGCQDEAERLEEQLGRL
SEGPASGLKELDSVLELLVQLTGSAPPPPASFSRDYMRRERPVLRRPPLGGYQSEELQRL
EARAWALMCGEEWGSLKGLCGTLGLMDAPPGTGLLALRRRSDVEERFEKETRMSLFGALQ
HSRTSDLDIRLNLPPVPSNADVTGLAIRVPPCLDQLEDEGFQSASNLTPDSQSEPSPSPE
LDVWDALRTFEPGRRRCWESVGCPPGKREFPYLTEGGREAFDQLYRLWEGEMRVVCSASP
SPLLPLPLDCQTQLVSDLLNVLIGVASTTFPLNQVCVNFDVRPGVCVSGASPESVSRLLG
ELAQYGTHYLRLSRFVLQSAQKRGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFL
FRKVGRQLRYLSELCCVDGASGVGQATFPVGVTLLSYLYNEAQSNCSNENYPVLLSLLKS
SCEPYTRFVSDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWAQGYTLISRDVEDCVPVF
LRHIANDVYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEEIERDCAVYRGRM
ERIAKHSATSREEQALRTEQARQELINQVRQSAAKTLESIRGRQVSQRLAEEAKKRERFE
ELRQHLEQEQEWHSLARRKEQEDEFSFARELRDREKRLQALEEQLEIRARKELIAQYSHL
SEEAAKREWRAMWRVQRMRLDDSRAQFLQQDQQETEAILEKYPVGGQRPPLEILQPAPAQ
TTQPLTQESLSPEPCEQQSEEPTQAPLHHHSTPPALPTTKLDLALVTEHIDANDFLPKPS
DSLQVDQALQEIGSDLPEALAPHKPVDYDFSAPYSPLEGVTAPALARPRWGPVVQPDVAH
PHIPTGPPESTLGMGCVVSGTLALPSPLPGSTYGHSSDSTMGVGCVVSGAEVLPRPSPHG
QASQSSIPLGQYFSDVPLALHTANVHGHPSQTTVQLVDGSESKQMDSRQENTEDPPPPGS
IVKEAEGTVEASCLVEMKPAEMEKLDCVGAEEQMAGSLREASASSTPEQGHDSGYHPGQA
STSLSGPSSVSELPTANIQGHASDAHIKVGEHVSDVEAPLPSQNVHGHSSDANIKVGEFV
SEATAPLPTANVHGHASDANIKVGEFVSEATAPLPTANVHGHASDAHIKVGDHVSEVVAS
LFTQNVHGHASDSHIKVGEHMSEEVASIHTQNIHGHSSDTHFKAGEFVLDAEPSRPRWSK
HGHASDCTLQVGCVMSGTEPVLSPLPGSTYGHSSESTLGIGCVVSGVELLHAPLPGSDFG
HASDSTLGGGCVVSGTVTLPSPIPGSDYGHSSDSAMGGGCVISGIEPVRPPLPGSNFGQS
SDSTLGTGCVVSGVSPLPSPIPGSIYGHSSDSALGGGCKVSGVNPLPSPIPGSIYGHSSD
SALGGGCKVKETGNEYDARTLEQQEQQRLAEGISSWAAGLALSPGESSEREYLRSLAAQY
QVEQYEDCYSLMTLAPECHPLHQVTRGPWGLPVDPSLRRATDTTVVQLSGMVSLPVLMKH
SVTTPLITHVSLVNKAVVDYYFVELGVERHFEALRHFLLMEDGEFAQSLSDLIFEKMGSG
QTPGELLTPLVLNSILSKALQYSLHGDSSLAPNFTFALRFLPETFHPHAPDALNCLELRY
KVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRDVWFHLKRTALVKGAGRSVQFRQL
QLYRHEMQHFVKVIQGYIANQILQVSWLEFTTKLASASDLDAIHRTHADYLNRAIFRGLL
TEKAAPVMNIIHSIFSLILKFRAQLIAQPWDSQQGEAVHPSFIAMQQSYNTFKYYSHFLF
KVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgtactccagtccagatgtctgccttaaatctggcagtcacaacagtagcagtaacagc
aacagcatcactgaactcttgggctccctgtgtgacagcagcctcactggggtgtcatgg
aaacgtcgtgctctaggaggggtgtctcgagagggggtccgccgcactctcagaaagcgt
gcctacggggccctgctgtccaaactgttccaggagggctccccgaaagggttcttgtca
gtacctagtgccacgtccaccaccccacccagaaacaagctacttatgatatcctttgac
ctgcgagtggcggggtgccaggacgaggccgagaggctggaggagcagctggggaggcta
agtgaggggcccgcctcgggtctgaaggagctggactctgtgctggagctcttggtgcag
ctgactggctctgcacccccacccccggcctcattcagcagggactacatgcgcagggag
aggcccgtgttgaggaggcctccactggggggctaccagagtgaggagctgcagaggttg
gaggcccgagcctgggccctgatgtgtggggaggagtggggatccctgaagggtctgtgt
gggactctgggtctgatggatgctcctccgggcacaggcctgctggcactgaggaggagg
tccgacgtagaggagaggtttgagaaggagaccaggatgtctctgtttggagccctgcaa
cactcccgtacctcagacctggacatcaggctcaatctgcctcctgttcccagcaatgct
gatgtcactgggctagccatacgggtgccaccttgtttggaccagttagaagatgagggc
ttccagtcagcctccaacctaaccccagactcccagtcagagcccagtcccagcccagaa
cttgatgtctgggacgccctgaggacttttgagcctgggagacgccgctgctgggagtct
gttggctgcccaccagggaagagggaattcccctacctgacggagggaggcagggaggct
tttgatcagctctacaggctgtgggagggggagatgagggtggtatgctctgcctccccc
tcgcccctcctgcccctgcctctggactgtcagacccagctggtcagtgacctacttaat
gtattgatcggggtggcgtctactaccttccccctcaaccaggtgtgtgtaaattttgac
gttcgacccggagtgtgtgtgtcgggagcgtcaccggagagtgtgtctcgtttgcttggc
gagctggctcagtatggcacccattacctgaggctcagtcgcttcgttctgcagagtgcc
caaaagagaggcctggtcttccaggcgtttacaggtgggctgcgtaagtacctgcattac
taccgagcctgtgtcctcagcacccctcccacccttagcctgctcaccatcggcttcctg
ttccgcaaggtgggccggcagctcaggtatttgtcagagttgtgctgtgtggatggggca
tctggtgtgggccaggctaccttccctgtgggtgtgacgctgctctcctacctgtacaac
gaggcccagagcaactgcagcaatgagaactaccccgtgctgctgtccctactaaagagc
agctgtgagccttacacacggtttgtgtcagactgggtgtacagtggagtgttccgggac
gtgtacggagagttcatgatccaggtcaacgaagactacctcagcttcagagacaagcac
ttctgggcgcagggctacacactgatctcccgtgatgtggaggactgcgtgcctgtcttc
ctccgacacatagccaacgacgtgtacgtctgcgggaagaccatcaacctgctcaagatc
tgctgtccccagcattacatctgctggtcggagctgcccgtgcctcgcatcgctgtcacg
ttctccctgcaggaggtagaggagatagagagggactgtgccgtgtaccgaggacgcatg
gagaggatcgccaagcacagcgccaccagcagggaggaacaggccctgcgcacagagcag
gcacgccaggaactgatcaatcaggtcaggcagtcggccgccaagaccctggagagcatc
cgcgggcgccaggtgtcgcagcgtctggctgaagaggcaaagaagagggaacgctttgaa
gagctgagacagcacttggagcaggaacaagagtggcacagtttagccaggaggaaggag
caggaggatgaattcagctttgccagggagctgagagaccgagagaagcgactacaggcc
ctggaggagcagctggagatccgagccaggaaggaactgattgcccagtacagccaccta
tcagaggaggcggccaagagggagtggcgggccatgtggagggttcagcgaatgagactg
gacgattcccgggcccagttcctacagcaagaccaacaggagactgaggctattctggag
aagtatcctgtcggagggcagagaccccctctggaaatactacagccagctccagctcag
accactcaaccattaacacaggagtccctatccccggagccctgtgagcagcagtctgag
gagccaacccaggccccccttcaccaccattccactcccccagcactccccaccacgaaa
ctcgacctcgccctcgtcacagagcacatcgacgccaatgacttcctgcccaagccgtcc
gacagcctgcaagtggaccaggccctacaggaaattgggtcggacctcccggaggctctt
gcgcctcataaacccgtagactatgactttagcgccccctacagtccccttgagggagtg
acggccccggccctggctagacctcgctggggtcctgtggtacagccagacgtggctcac
cctcacatcccaaccggtccccctgagtccactctaggcatggggtgtgtggtgtccggg
actttagctctcccgtctccgctacccggaagtacctacggccattcttcagactccact
atgggtgtagggtgtgtggtgtcaggagctgaggtcctccccaggcccagtcctcacggc
caggcctcccaatctagcatccccctgggccagtacttctctgatgtgcccctggctctc
cacacagccaatgtccacggacacccctcccagaccacagtgcagctggtggatggaagt
gagtcaaagcagatggacagcaggcaggagaatacggaagacccaccacctccagggagc
atcgtaaaagaggctgaagggactgtagaggcatcatgcctggtggagatgaagccagct
gagatggagaaactagattgtgttggagcagaggaacagatggctggttctctcagggag
gcttctgcctcctccaccccagagcagggccatgacagtgggtatcacccaggacaggcc
tccacttccctctctggaccctccagtgtgtctgagcttcctactgccaacattcaaggc
catgcctcagatgctcatattaaagtcggagagcacgtttcagatgtggaagcccctctc
ccttctcaaaacgttcacggtcactcatctgatgctaacataaaggtaggagagtttgtt
tcggaggcgactgctcctcttccgaccgccaacgttcacggtcacgcatctgatgctaac
ataaaggtaggagagtttgtttcggaggcgactgctcctcttccgaccgccaacgttcac
ggtcacgcatctgacgctcatattaaagttggagaccatgtttcagaagtggtcgcctcc
cttttcacccagaacgttcacggtcatgcctcggactctcacatcaaggtcggggagcac
atgtcagaagaggtcgcctccattcacacccaaaacatccacggtcactcatccgacact
cacttcaaggcgggtgagtttgtgttggacgccgagccctcccgaccacgctggagcaag
catggtcacgcctcagactgcacacttcaagtaggctgtgtgatgtctggcacagaacca
gtactctcccctttacctggtagcacctacggccattcctctgagtccacactaggtata
gggtgtgttgtctctggggttgaactccttcatgctcctctacctggaagtgactttgga
cacgcctcagactcaaccctgggtggagggtgtgtggtgtcaggaacggtaacccttcct
tctccgatacccggaagtgactacggccattcgtcagattcagcgatgggcggagggtgc
gtgatatctgggattgaacccgttcgccctcctcttcccggcagcaacttcggacagtcc
tcagactccacactgggcacagggtgtgtggtgtctggtgtaagccctctgccatccccc
atccctggcagtatctacggccacagctcagactctgccctgggagggggctgtaaggtg
tcaggtgtaaaccctctgccctcccccatccctggcagtatctacggccacagctcagac
tctgccctgggagggggctgtaaggtgaaggagactggtaatgaatacgacgccaggacc
ctggagcagcaggagcagcagcggctggccgagggcatctcgtcctgggcagcgggcttg
gctctgtccccaggcgagagctcagagagggagtacctccgctccctggctgctcagtac
caggtggagcagtacgaggactgctacagtctcatgacgttggccccagagtgtcacccc
ctgcatcaggtgacgcggggcccctggggcctcccggtggacccatcgctccgcagggcc
acagacaccacggtggtgcagcttagtggaatggtctccctgcccgtcctcatgaagcac
tctgtcaccaccccactcatcacacatgtatccttggtgaacaaggcagtggtggactac
tacttcgtagagcttggagtggagaggcattttgaggccctcaggcacttcttgctcatg
gaggacggggagttcgcccagtctctcagtgacctgatctttgaaaagatgggcagtggt
cagactcctggagagctgttgactcctctggtcctgaactccatcctgagtaaggctctt
cagtatagtcttcatggagacagttctctggcccctaacttcaccttcgccctgcgcttc
ctcccggagaccttccatcctcacgcccccgacgcactcaactgcctggagctacggtac
aaggtggactggccgttgaacatcataatcacagacagctgtatgaacaagtacaaccgt
ctgttctccttcctgctgcagctcaaacacatggtgtggagcctcagagacgtctggttt
cacctcaagaggactgcgctggtgaaaggggcgggccgctcggtccagttccgccagctg
cagctgtacagacacgagatgcaacactttgtgaaggtgatccagggttacatcgctaac
cagatcctgcaggtgtcctggttagagttcaccaccaagctggccagtgcctcggacctg
gacgccatacaccgcacacacgccgactacctcaacagagctatcttcaggggtctgctg
acagagaaggcagctccagtcatgaacatcatccacagtatcttcagcctgatcctcaag
ttccgggcccagctgatcgcacagccctgggacagccagcagggggaggcagtgcacccc
agcttcatcgccatgcagcagtcatacaacactttcaaatactactcccacttcctcttc
aaagtggtgaccaagctggtgaaccgaggatatcagcctcacctggaggacttcctgctc
cgcatcaacttcaacaactactacaaagactcctga
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