Oncorhynchus tshawytscha (Chinook salmon): 112218164
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Entry
112218164 CDS
T05605
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112218164
Enzymes [BR:
otw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
112218164
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112218164
Prokaryotic type
112218164
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
112218164
NCBI-ProteinID:
XP_024234513
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All DBs
Position
LG19:18963750..18975374
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AA seq
721 aa
AA seq
DB search
MGGFQGVTISGVKYTWVGNLAYFIVRSLLNPCTSRSIRNSLWVALRYHTPHLRTPDIGAP
GVCQIHSFFFEVPISNLLIPMADAEPMLVPAPGGEKRACPALEEEVDHSTKRPRVQKEEK
NGGPSHKLPQDEGEEPEGEETEPLDEDGEGEGLGSGEAFAEMMKHGLTELDVGILKFVSE
HQGFSGILKERYSDFVVHEINKEGKTVRLDDLSVPEEAEEAPVEQPESQVFTEEQKQQLE
QLQLFKNKEGNVSIEVADDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQK
ALAAPRKHSWPKSRGAFCHFVLYKENRDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITV
QEIAVLKITAERLSHLNKCLNNFKLGNFCYKKHPLKLGELQGNHFTVVIRNITGTEEQVQ
QAMSSLRETGFINYYGMQRFGTTAVPTHQVGKAILQDNWKEVIDLILKPRPGAEKGYLVK
CREEWAQSQDPEAALKKLPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQ
SFMWNTMVSRRIEAFGLKAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYPT
HHVGKGYREMLSADNLDIDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYEDPRVSLVH
TDVEKLEDQPPPVFNKEGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWL
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggtttcaaggagtgactatttccggagtcaaatacacgtgggtaggaaacctg
gcgtactttattgtgcgctctctactaaacccctgtacgagcaggtccatcaggaattct
ctttgggttgctttgaggtaccatacaccccatctacgaactcctgacatcggagcacca
ggtgtctgccagatacacagctttttctttgaggtccctatcagcaatctcttgatccct
atggccgatgcagagcccatgctggtccctgcccctgggggggagaagagagcatgccct
gctttggaggaggaggttgaccacagcaccaagagacccagagtccagaaggaggagaag
aacggagggccctctcacaagctgccccaggatgagggagaagagccagagggggaagag
acggagccattggacgaggatggagaaggggaagggttggggtcaggagaggcctttgca
gagatgatgaagcatggcctcacagagctggatgtggggattctgaagtttgtcagtgaa
caccaggggttctcaggcattctcaaggagaggtactctgactttgtggtgcacgagatc
aacaaagaaggcaagactgtgcggttggatgatctctccgttcctgaggaggctgaggag
gccccagtagagcagccagagtcccaggttttcacagaggagcagaaacagcagctggag
cagctacaactcttcaagaacaaagagggtaatgtttctatagaggtagctgatgacaca
aaagagaagcggaccctggtccacaaggctgtgaagaccctgtaccctggactggagaca
aagacagaggagcgagagggaaagaagttcatcgtggcctaccacgcagctggacagaaa
gccctcgcagcccccagaaaacactcctggcctaagagccgcggggccttctgccacttc
gtcctctacaaggagaacagagacaccatggaggccatcaacgtgctctccaagttcctc
aggatgaggcccaatgtcttctcctacatggggaccaaggacaagagagccatcactgtg
caggagattgccgttctcaagatcacagcagaaagactgtctcacctcaacaagtgcctc
aataactttaaactgggaaacttctgctacaagaaacaccctctgaagctgggagaacta
cagggcaatcacttcactgtggtcatcaggaacatcacagggacagaggagcaggtccag
caggccatgtcctcccttagagagacgggcttcatcaactactacggcatgcagcgcttt
ggcaccaccgccgtgcccacacaccaagttggcaaggccatcttgcaagacaactggaag
gaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggttatctggtgaag
tgccgtgaggagtgggcccagtcccaggacccagaagcagctctaaagaagctgcctgtt
aaacgctgtgtggagggacagctgctccgaggtctctccatgtacggaaagaagaacatc
atcactgccttcgccatgatccctcgtaacaaccggctgatgtacatccacagctaccag
agctttatgtggaacaccatggtcagcagacgcattgaggccttcggactgaaggctgtg
gagggagacctcgtgctcaggggaggcactgcattcgtgctgtccgcagcagaggccgag
acccactctatccaagacgtggtgatgcccctaccaggttttgacgtcatctaccccact
caccacgtgggtaagggctacagggagatgctgagtgcagataacctggacattgacaac
atgagacacagggtgagggactactctctggccggggcctaccgacgcatcctcatcaaa
cccagtgacgtcagctgggaggtgattaactatgaggaccctcgtgtctccctggtccac
actgatgtggagaaactagaggaccaacctcccccagtcttcaacaaagaggggaagtac
agggctctgaggatggagttctccctgcctccctctacctacgccaccatggccatcaga
gaggtgctcaagatggacaccagcatcaagaaccagactcagctcaacaccacctggctc
aactaa
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