Oncorhynchus tshawytscha (Chinook salmon): 112218172
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Entry
112218172 CDS
T05605
Name
(RefSeq) tyrosine--tRNA ligase, mitochondrial isoform X1
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112218172
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112218172
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112218172
03029 Mitochondrial biogenesis [BR:
otw03029
]
112218172
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
112218172
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class I (A)
112218172
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112218172
Prokaryotic type
112218172
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112218172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
112218172
NCBI-ProteinID:
XP_024234523
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All DBs
Position
LG19:18470391..18479855
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AA seq
480 aa
AA seq
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MAASIARFFSRVSWHGSCIILKNTLPCISLRYTFHRSATTQSGLLFSLNKRGILKDAFPE
NAAQDQLPQLLQSGCQTVYCGFDPTADSLHVGNLLAIVGLLHFRSAGHNVIALIGGATAQ
IGDPSGKTSEREQLPSDVVEDNTRAIRDSLQRIFTNHELHFHNDSKKLGTVTLMNNLAWY
KDWNVVAFLSEVGRRFRMGTLLSRHSVQSRLKSAEGMSLTEFSYQLFQAYDFYHLNQNHS
CKIQLGGTDQLGNLMSGHEFIHKVTGQDVYGLTIPLVTSSAGDKLGKTAGNAVWLNRDKT
SPFDLYQFFLRQPDSSVEWYLKLFTFLPLAEVERVMEQQRQEPGKRPAHKRLAAEITKLV
HGKEGLESAKRCTNALYHSNLQALEQMSDAELQELFREASFHELLLEPGTTVLDACRRAE
AIPQGGKGYRMVSEGAVWINHSKTDSPEQVLIPGQHLLANGLSLLKVGKKNFHIIKWLNL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatccatagccaggtttttttcacgtgtatcgtggcatggttcttgtattatt
ttgaaaaacacactcccttgtatatcgttaagatacacgtttcatcgctctgcaacaacc
caaagtggacttcttttttcgctaaataaacggggcattttgaaggatgctttccccgaa
aacgcagcccaagatcaacttcctcaactgctgcagtctgggtgccagaccgtgtactgc
ggattcgaccccacggcggacagccttcacgtgggtaatttactcgccatcgtcgggcta
ttgcattttcgaagcgcaggacacaatgtcatcgctctaatcggtggtgcaacagcacag
ataggggacccaagcgggaaaacgagcgagagagagcagctaccgtctgatgtagtggag
gacaatacaagggctatcagggacagcttgcagcgaatcttcaccaaccatgaactgcat
ttccacaacgactctaaaaagcttggcactgtaaccctaatgaacaatttagcttggtac
aaagactggaatgtggttgcttttctgtcagaagttggcagacgtttccgaatggggacc
ctgctcagtaggcacagtgtccagtctaggctgaagagtgcagagggcatgagcctaact
gagttctcttaccagctgtttcaagcttatgacttctaccacctgaaccagaatcatagc
tgtaagatccagctgggagggacagaccagctgggcaacctgatgtctgggcacgagttt
atacacaaggtgactggacaggatgtgtatgggctaaccatcccactggtgaccagctct
gcgggggacaagctggggaagacggcaggcaatgcagtgtggctgaacagggacaagaca
tctccgtttgacctctatcagttcttcctcaggcagcctgacagcagtgtggaatggtat
ctgaagctgttcaccttcctacccctggccgaggtggagagggtgatggagcagcagaga
caggagccaggcaaacggcccgcacacaaacgcctcgccgccgaaatcaccaaactggtc
cacggcaaggagggtctggagagtgccaaaaggtgcaccaatgccctgtaccacagtaac
ctacaggccctggagcagatgagcgatgctgagctgcaggagctcttcagagaggcctct
ttccatgagctgctgctggagccagggaccacagtactggatgcctgccgcagggcagag
gccatcccccaggggggcaaagggtatcgcatggtatcagaaggagctgtatggatcaac
cacagtaagacagacagcccagagcaggtactgatccctggacagcacctcttggccaac
ggactttctctcctcaaagtgggcaagaagaacttccacatcatcaagtggctcaatctg
tga
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