Oncorhynchus tshawytscha (Chinook salmon): 112218174
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Entry
112218174 CDS
T05605
Name
(RefSeq) peroxisome proliferator-activated receptor alpha
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
otw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112218174
03320 PPAR signaling pathway
112218174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112218174
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112218174
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112218174
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
112218174
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112218174
NCBI-ProteinID:
XP_024234525
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Position
LG19:18395821..18453538
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AA seq
464 aa
AA seq
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MASHYRPPSPLEDSVLGSPVCGDFLGGMEELQDIPQSIDGDALSSLDVPEYQSQSSNGSE
GSTVLDALTPASSPSSGGYGAAAGLEEFSSTSLNLECRVCADRASGYHYGVHACEGCKGF
FRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQSEKLKLK
AEILTGDREVEDPQQADQKTLARHIYEAYLKNFNMNKAKARTILTGKTSTPPFVIHDMET
LQLAEQTLVAKMVGTAGGHLLEKEAEVRIFHCCQCTSVETVTELTEFAKSVPGFSSLDLN
DQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPKFQFAM
KFNGLELDDSDLALFVAAIICCGDRPGLVNVTHIECMQENIVQVLQLHLLANHPDDTFLF
PNLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccactaccggccgccgtcccccctggaggattcggtgctgggcagcccggtg
tgtggggacttccttgggggcatggaggagctgcaggacatcccccagtccatcgacggt
gacgccctcagctccttggacgtccccgagtaccagtcccagtcgagtaacggctccgaa
ggatccaccgttctagatgctctgaccccagcatccagcccgtcgtcaggggggtatggg
gcggctgcagggctggaggagttctcctccacctctctcaacctggagtgtcgggtgtgt
gccgaccgcgcctccggataccactacggagttcacgcctgtgagggctgcaagggtttc
tttcggcggaccatccgcctgaagctggaatacgacaagtgtgagcgtcgctgtaagata
cagaagaagaaccggaacaagtgccaatattgccgctttcagaagtgcctgtctgtgggc
atgtcccacaatgcgatccgttttggtcggatgccccagtctgagaagctgaagctgaag
gcagagatcctgacgggtgacagggaggtggaggacccccagcaggctgaccagaagact
ttggccaggcacatttatgaggcctacctcaagaacttcaacatgaacaaggccaaagcc
cgcaccatcctcactggcaagacgagcactccacccttcgtcatccatgacatggagacc
ctccagctggcagagcagaccctggtggctaagatggtgggcacggccggaggccatctg
cttgagaaggaggctgaggtccgcatcttccactgctgccagtgcacctccgtagagacg
gtcacagagctaaccgagttcgccaagtctgtccccggcttctccagcctggacctgaat
gaccaggtgactctgctgaagtacggcgtgtatgaggcactgttcgctctgctggcatcg
tgtatgaacaaggacggcctcctggtggcctacggatcgggcttcatcacgagggagttc
ctcaagagtctgaggaggcccttcagcgacatgatggagccaaagtttcagttcgccatg
aagttcaacgggctggagctggatgacagtgacctggctctgtttgtggctgccatcatc
tgctgtggagaccgccctggcctggtgaacgtgacccacatcgagtgcatgcaggagaac
attgttcaggtgctgcagctccacctgctggccaaccacccagacgacaccttcctcttc
cccaatctgctgcagaaacttgctgacctccgtcaactggtcaccgagcatgcgcagttg
gtccaggagatcaagaagacagaggacacgtcactccaccccctgctgcaggagatctat
agggacatgtactga
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