Oncorhynchus tshawytscha (Chinook salmon): 112218185
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Entry
112218185 CDS
T05605
Name
(RefSeq) nuclear transcription factor Y subunit beta
KO
K08065
nuclear transcription Y subunit beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112218185
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
112218185
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
CENP-T_C
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
112218185
NCBI-ProteinID:
XP_024234541
UniProt:
A0A8C8IZK4
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All DBs
Position
LG19:191104..236650
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AA seq
205 aa
AA seq
DB search
MDGDSSTTDASQLGMSGEYMAGSHYVLQSQDDDGDESLHDHEEGNGSKENFREQDIYLPI
ANVARIMKNAVPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFA
MSTLGFDMYVEPLKLYLQKFREAMKGEKGIGGVSVTEGLGEELTDDSFANQLPAGIITAD
GQQQNVMVYTTSYQQIPGVQQIQFS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacagttcaaccaccgacgcctctcagttgggaatgtcaggggagtacatg
gcaggaagccactacgttcttcaatcacaggacgatgatggggatgagagcctgcatgac
catgaggaaggcaacggcagcaaggaaaacttccgtgagcaggacatctacctccccatc
gctaacgtggctcgcatcatgaagaacgctgtcccacagacaggaaagatagcaaaagat
gccaaggagtgtgtgcaggagtgtgtcagcgagttcatcagcttcatcacgtcggaggcc
agtgagcgctgccaccaggagaagaggaagaccatcaacggcgaggacatcctgtttgcc
atgtccaccctgggcttcgacatgtacgtggagcccctgaaactctaccttcagaagttc
agagaggcgatgaaaggggagaagggaatcggaggcgtatctgtaacggagggactcgga
gaagaactcacggacgacagcttcgcgaaccagttgcctgctggaataataactgctgat
ggacaacaacagaatgtcatggtttacaccacctcgtaccaacagattcctggagtgcag
cagatccagttctcttga
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