Oncorhynchus tshawytscha (Chinook salmon): 112218213
Help
Entry
112218213 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112218213
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112218213
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112218213
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112218213
Proteoglycans [BR:
otw00535
]
Cell surface proteoglycans
Others
112218213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
PTPlike_phytase
PTP-NADK
Y_phosphatase3
GUN4_N
Motif
Other DBs
NCBI-GeneID:
112218213
NCBI-ProteinID:
XP_024234599
LinkDB
All DBs
Position
LG19:1220400..1290579
Genome browser
AA seq
1823 aa
AA seq
DB search
METAVSRGLLLAQLLIVCQLAELVQGYGYRAQRKFSEDIDWSYAGTLNQNNWAKKYPSCN
NARQSPINIEEELTQVKVQFQKLKFEGWEEAMSDGTTIKNDGKTVAVNPEGDFYVSGGGL
RGRFKVGRITFHWGRCNASSEGSEHSLNGVKYPLEMQIYCYEAHRFESLDYAIKDGGRIT
ALSVLFETSIEDNDNYIAIIDGINSVSRFGKSGRVGPFSLRGLLPNSTEKYFIYNGSLTT
PPCTETVEWIVFKNTVAISDTQLEMFCEVMTMQQAGYVMLMDYLQNNYREQQQQFMGQAF
SSYTGTEEVLTPICSSEPENVQADPHNLTSLLVMWERPRAVYDAGIEKYSVTYKLAQGED
PPAFEYLTDGDQDVGAILQDLMANTSYVVQVLAVCTNGLYGRVSEQLTVDMPIDDPEETP
DPDSTGFAEEEDYGPRVEPGEDQDNDMDWTTPSSTTTRPKTTTGLPSLPLPGIRTTTPSV
QRRTTTPGSPFKTTQPNRSHMSTEPSVRYRTTTRAPAEGAVSPGSRGSGSTQKYTTTATM
PLYRTDDVTTSSTRKEKGRGVAHPVTVPSDKGSGVPIPLPESWTTSSPSLFQGVPPQPTS
PSMPLFSSTASSFGSVLSQTTQPVFNGEILPSTLPVCDTSTPGYPGSAPSNAPTATACLH
APPSSRPVSSVTPPARDSPHAATALLSSGDSFLAPSSLSSPTLPLLPHPSHPLSGWETVV
SHGVGDEGDDDSGDGDVLSGSSSMASGDPALFSDTPPLQTLPDSLIEWDLSELASRPLPA
ASLSLQPSLLLSSDFSLSGATPGITDYVYGRLGDSSYATGGVIESSLSWVVDGGGGFTVA
SNGVESLCSCSLDGTSSSSWLHASPHLPLPTSDWGAASLALYSSGSDLDHLIHSSLAGST
NPSVGQPLFSSSSSSPVPHPPLSGSHGDLHVSVTATPPRSKDRWVSALRTSAPSSSSSRT
ASPVTPTLTPDLQTVDSNASGSTLSGEAQEELDEEWDRIQSSASASASGEGMLPYIPTAS
PPFTSEVAASPDSDNDERSSAFYFESESGSAVATETAGSTATVSAITAAVPWPLGGEEQS
GSGQGESPYDNEMSSDFSIPERTERDSEEEEPIAEASNSSHESRVGLARDKERRAVVPLA
VVSTLTFVGLIILVGILIYWRKCFQTAHFYIEDNTSPRVISVPPTPLLTATDEHEAFAVK
QFVKHVTELHHTNAFSREFEILKECYEEVQVCTVDLGITADGSNHPDNKNKNRYINILAY
DHSRVRLSTQADKDGKSGDYINANYVDGFNKSRAYIAAQGPLKSSTEDFWRMVWEQNVGV
IIMITNLVEKGRRKCDQYWPLESQDEYGGFLVTVKSSKVLAHYTERTFTLRNTKVQKGSL
KGRINERTVTQYHYTQWPDMGVPEYTLPVLTFVQKSSKARTDDMGPVVVHCSAGVGRTGT
YIVLDSMLKQIKEEGTVNIMGFLKHIRTQRNHLVQTEEQYVFIHDALVEAILGKETEVSS
SLIHSYVNDLLTPGSSGRTQLEKQFKLVSQSNDKQCDYSAALKECNREKNRNSSLIPVER
SRVCLSTVVGETTSDYINASYITGYRQSTEFIVTQNPLAGTVTDFWRMIWDHNAQVIVTL
PGTPATLGTPSLAEGEEPYVYWPRKEQTISCEAFTVTLRSENHVCLANEEMLVVQDYVLE
ATQDDYVLEVRHYRAPRWPNPDSPISSTFELLSLVREESSSKEGPMVVHDEVGGVTAGTF
CALSTLVCQLELESSVDVYQVAKMINLMRPGTFNDVEQYQFLYKAMLSLVGTQEDERTLQ
SSDNNGTVPGGPVSTAESLESLV
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggctgtttcaagaggcttattgctcgctcagctcttgatcgtctgtcaatta
gctgaactggtgcaaggatacggataccgggcccagcgcaaattctcagaagacatcgac
tggtcctatgcgggaactctcaaccaaaacaactgggccaagaagtacccatcatgtaac
aatgccagacagtcgcccatcaacatcgaggaggagctgacacaggtcaaagttcagttc
caaaagctgaagttcgagggctgggaggaagcgatgtctgatgggaccaccatcaagaat
gacggcaagacagtggcggtgaacccagagggggacttctatgtgagtggaggggggctg
aggggcaggtttaaggtgggaagaatcaccttccactggggacgctgcaacgcctcctca
gagggctccgaacacagcctcaacggggtgaagtacccccttgagatgcagatctactgt
tatgaagcgcatcgctttgagtccttagactacgccatcaaggacgggggcaggatcaca
gctctctctgtgctgtttgagactagcatcgaagacaatgacaactacatagccattatt
gatggaatcaacagtgtcagtcgattcggtaagagtgggagggtgggtcccttctctctc
cggggcctcctgcccaactctacagagaagtacttcatctacaacggctccctcaccacc
ccaccctgcactgagaccgtggagtggatcgtcttcaagaacactgtggccatctccgac
acgcagctggagatgttctgtgaggtgatgaccatgcagcaggcaggctacgtgatgctg
atggactacctgcagaacaactacagggagcagcagcagcagttcatgggccaggccttc
tcctcctacaccggcacagaggaggtcctcactcccatctgcagttcagagccggagaac
gtgcaggcagacccccataacctgaccagcctgctggtgatgtgggagcggccacgggcg
gtgtacgacgccgggatagagaagtactcagttacctacaagctagcccagggagaggac
cctccggcctttgagtacctgaccgacggagaccaggatgtgggggccatattgcaggac
ctgatggccaacaccagctacgtggttcaggtcttggcggtctgcaccaacggtctgtac
ggccgcgtgagcgagcagctgactgtcgacatgccgatcgacgaccccgaggagacccct
gatccagattctactggatttgcagaggaagaggactatggaccccgggttgaaccgggt
gaagaccaggacaatgacatggactggaccaccccaagctctacgacgaccaggcccaaa
acaaccacgggcctaccaagcctccccttgcctggtatcagaacaaccaccccttctgtc
cagaggagaaccaccactccagggtctcctttcaagaccactcagcccaaccgatcccat
atgtccacggagccgagtgtaaggtaccgcaccacgaccagagctccagcagagggggca
gtctcaccaggcagcagagggagcgggagtacccagaagtataccacaacagcgaccatg
ccgctgtatcgcactgatgacgtcaccacttcctcaaccagaaaggagaagggcagaggg
gtggcgcaccccgtgaccgtcccaagcgacaaaggcagcggtgttcccatccctctgccg
gaaagctggaccacttcttccccctccctttttcagggggtaccaccacagcctacaagt
cccagcatgcccttgttttcgtccactgcctcctccttcggcagcgttctctcgcagacc
acgcagccggtgttcaacggtgagatcctcccctccacccttcctgtgtgtgacacgtcg
acccctggttaccccggctccgcccctagcaatgcccccaccgccaccgcctgcctgcat
gcccctccttcgtctagacctgtgtcgtctgtgacccctcctgctcgggactccccgcat
gctgctacagcactgttgtctagtggtgactcattcctcgctccctcctccctctcctcc
cccaccctgcctctcctccctcacccctcacaccccctgtctggttgggagaccgtagtc
tctcatggtgttggcgatgaaggcgatgatgatagtggtgatggcgatgtgttgtctggt
tcttcatccatggcctcaggtgaccccgcactatttagtgacactcccccccttcaaact
ctccccgactcgctcatcgagtgggacctgtctgagctagcctctagaccgctccctgca
gcctctctctccctgcagccttctcttctcctctctagtgacttctccctgtccggggcc
accccgggaatcactgactatgtctatggcaggctgggggactctagttatgctacgggc
ggtgtaatagagtcttctctgtcgtgggttgttgatggtggcggagggttcacggtagct
agcaatggtgtggagtcgttgtgtagctgttctctggatggcacctcgtcctcttcctgg
ttgcatgcctctcctcacctccccctgcccacgtctgactggggggcggctagcctagcg
ctctactcctctggtagcgacttagaccatctcatccattcatctctggcgggctccacc
aacccgtctgtaggtcagcctctcttctcttcctcctcctcttctcctgttcctcatcct
cctctctccggttcccatggtgatctgcacgtttctgttacagccacgccgccccgctcc
aaggaccgctgggtctcggccctccgaacctccgccccctcctcctcttcctctcgcacg
gcctcccccgtcacccccaccctcacccctgacctgcagacggtagacagtaatgcgtct
ggctcgaccctgtcgggagaagctcaggaggagctagatgaagagtgggacaggattcaa
agttcagcctcggcctcggcctcaggggagggaatgctcccttacatccccaccgcctcc
cccccattcacctctgaggttgccgcctctcccgattccgacaatgatgaacgctcctct
gcgttttactttgagagtgagagtggcagcgccgtcgccacggagacggcggggagcacg
gcaacagtatctgcgataactgcggcggtgccctggccgctaggtggggaggagcagagt
ggctcgggacagggtgagagcccatacgacaacgagatgtcctcagacttcagtatcccc
gagcgcacagagagagactctgaggaagaggagccaatcgcagaggccagtaacagcagc
catgagtccagggtgggtctggccagggataaggagaggagggccgtggtccctctggcg
gtggtctccaccctcaccttcgtgggactcatcatcctggtgggcatcctcatctactgg
aggaagtgtttccagactgcccatttctacatagaggacaacacatcgcccagagtcata
tctgttccacccacaccattgcttacagctacagatgaacatgaagcctttgcggtgaag
cagtttgtcaagcacgtgacagagctccaccacaccaacgcattctcccgggagtttgag
atattgaaagagtgttacgaggaggtgcaggtgtgcacagtggacctgggtatcaccgca
gacggctccaaccatccagacaacaagaacaagaaccgatacatcaatatcctggcctat
gaccacagccgagtaagactctcaacccaggctgacaaagacgggaagagtggagattac
attaacgcaaactacgttgacggtttcaacaagtccagggcctacatcgcagcccagggc
cctctcaagtccagcaccgaggacttctggaggatggtgtgggagcagaacgtgggcgtc
atcatcatgattaccaacctggtggagaagggacggaggaagtgtgaccagtactggccc
ctggagagccaggatgagtacggtggtttcctggtgacggtgaagagcagcaaggttctg
gcccactacaccgagagaactttcaccctcaggaacaccaaggtccaaaagggttcactg
aaggggcggattaacgagcggaccgtgacacagtaccactacacccagtggccagacatg
ggcgtgcctgagtacacactccccgtgctcaccttcgtccagaagtcctccaaagccagg
acagatgacatggggcctgtcgtagtgcactgcagtgcgggcgtaggcaggactggcacc
tacatagtgttggatagcatgctgaagcagatcaaagaagagggcacggtcaacatcatg
ggtttcctcaaacacatccgcacacagaggaaccacctggtacagacagaggagcagtat
gtgttcatccacgacgccctggtggaggccatcttgggcaaggagacggaggtttcctcc
agcctcatccacagctacgtcaatgacctcctgaccccagggtcctccggcaggactcag
ttggagaaacagtttaagctggtatcccagtccaatgacaaacagtgtgactactcggca
gccctgaaagagtgcaacagagagaagaacagaaactcctctttaatacccgttgaaagg
tcacgggtgtgtctgtccacggtggtgggagaaactacatcagattacatcaacgcctca
tacattacggggtaccggcaaagcactgagttcatcgtgacccagaacccactggccggc
acggtgacagacttctggaggatgatctgggatcacaacgctcaggtcatcgtcacactg
ccgggaacaccagcaacactgggaacaccaagcctggcagagggggaggagccgtacgtg
tactggccccgcaaggagcagacaatcagctgtgaggcgttcacagtgaccctgcggagc
gagaaccatgtgtgtctggccaacgaggagatgctggtggtgcaggactatgtcctggag
gctacacaggatgactatgttctagaggtgaggcactaccgggcgcctcgctggcccaac
ccagacagccccatcagcagcaccttcgagctgctcagcctggtgagggaggagagctcc
tccaaggagggccccatggttgtccatgacgaggttggcggtgtgactgcgggaaccttc
tgtgccctgtctactctggtgtgccaactagagttggagagctctgtggacgtgtaccag
gtggccaagatgatcaacctcatgaggcccgggaccttcaatgatgttgagcagtaccag
ttcctgtacaaagccatgctgagcctggttggcacacaggaggacgagaggacgctccag
tcctctgacaacaacggaacggtcccagggggccctgtcagcacagccgagagccttgag
tccctggtgtaa
DBGET
integrated database retrieval system
