Oncorhynchus tshawytscha (Chinook salmon): 112218272
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Entry
112218272 CDS
T05605
Name
(RefSeq) sorting and assembly machinery component 50 homolog A
KO
K07277
outer membrane protein insertion porin family
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112218272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112218272
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112218272
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
112218272
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112218272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
112218272
NCBI-ProteinID:
XP_024234694
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Position
LG19:5161414..5174481
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AA seq
490 aa
AA seq
DB search
MSLHFLKLTPTFEVRYILDVIMKTVHARSLDPLPMQGPELGFQADDIERPDMEQESKQEV
LENKVVIVQRVHIDGLGRTKEDCLTYEIADVFRAKNLIDVMRRAHEARQKLLRLGIFRQV
DVVIDTSQGVDALPNGLDVTFDVTELRRMTGSYNTMVGNNEGCMVLGLKLPNVFGSAEKL
TFQVSYGTKETSYGLSFFKPQPGHFERSFAVNLYKVAGQFPWSSLRETDRGVSTEFSFPL
WKTNHTLKWEGVWRELGCLERTASFAVREESGHSLKSSLSHSMVIDTRNSAILPRRGALL
KINQELAGYTGGDASFLKEDFEIQFNRHLFWDSVLSASLWGGCLLPIGDKPTCIADRFYL
GGPTSVRGFSMYSIGPQSEGDYLGGEVYWAGAVHLYTPLPFHPGKGGFGDLFRTHFFLNA
GNLCNLNYGDGPQAHLRKLAECIRWSYGAGIVLQLGNIARLELNYCIPTGVQSGDRICDG
FQFGAGVRFL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcatttcttaaaattaacaccaacatttgaagtacggtacattctagacgta
atcatgaaaaccgtccacgcgaggagtcttgatcctctaccaatgcagggacctgagctg
gggtttcaggcagatgacattgagaggccagatatggagcaggagtcaaaacaagaggtc
cttgaaaacaaagtggtcatagtccagcgtgtacacatagatggtctcggaagaaccaag
gaggattgcttaacatacgagattgctgatgtcttccgtgccaagaacttgattgatgtc
atgaggagagcccacgaagccagacagaagctcctgcgtctcggtatcttcagacaagtg
gatgttgtcatcgatacctcacaaggggtggatgctctgcctaatggactagatgtgacg
tttgatgtgactgagctgagacgcatgactggtagctataacaccatggttggaaataac
gaaggctgcatggttcttggtctcaagctgcccaatgtcttcggttctgcagaaaagctc
accttccaggtctcctatggcacaaaagagacttcctacgggctgtcgttcttcaagccc
caacctggccactttgagcgcagtttcgctgtcaacttgtacaaagttgcaggccaattt
ccatggagctcgctgagagagactgatcgcggtgtctccacagagttcagtttccctctc
tggaagaccaaccacaccctgaagtgggagggggtgtggcgagagctgggctgtctggag
cgtaccgcgtcgtttgcagtccgggaggagagcggccactccctcaagtcatcactctcg
cactccatggtcatcgacaccagaaactctgcaatccttcccaggaggggggccttgctg
aagatcaaccaggagttggcaggatacactggaggagatgccagcttcctgaaggaggac
tttgagatccagtttaacagacatctcttctgggactcggtcctgtctgcatctctctgg
gggggatgcctcctgcccattggagataagccaacttgcattgctgacaggttctatctt
ggtggtccaactagcgtcaggggcttcagtatgtacagcatcggccctcagagtgaaggt
gactacctgggaggtgaggtgtattgggctggagccgtccacctgtatactccactgccc
ttccatccaggcaaagggggatttggagacctcttcaggacccacttcttcctcaatgcc
gggaacctgtgtaacctcaactatggtgacgggcctcaagcacacctgaggaaactggct
gagtgtatccgctggtcttacggagcgggaattgtgctgcaactcggaaacatcgcccgg
ctggagctcaactattgcattcccacgggcgtccagagtggagacaggatatgcgacggg
tttcagtttggagctggagtccgattcctgtga
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