Oncorhynchus tshawytscha (Chinook salmon): 112218274
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Entry
112218274 CDS
T05605
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112218274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112218274
03041 Spliceosome [BR:
otw03041
]
112218274
03032 DNA replication proteins [BR:
otw03032
]
112218274
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112218274
Spliceosome [BR:
otw03041
]
Complex A
U1 snRNP components
Sm proteins
112218274
U2 snRNP components
112218274
Complex B
U1 snRNP components
112218274
U4/U6.U5 tri-snRNP components
112218274
Complex C
U2 snRNP components
112218274
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112218274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
112218274
NCBI-ProteinID:
XP_024234700
LinkDB
All DBs
Position
LG02:30567358..30570448
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AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVAT
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaagggcagaaggtccagaaggttatggtgcagccaatcaacctt
attttcaggtatctacagaaccgttcccggatacaggtgtggctgtatgaacaagtgaac
atgcggatagagggctgcatcatcggctttgacgagtacatgaacctggttctggatgac
gctgaggaggtccacatgaagaccaagaacaggaagcccctggggaggatcatgctgaaa
ggtgataacatcaccttgctacagagtgttgccacttaa
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