Oncorhynchus tshawytscha (Chinook salmon): 112218300
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Entry
112218300 CDS
T05605
Symbol
phf21ab
Name
(RefSeq) PHD finger protein 21A isoform X1
KO
K24651
PHD finger protein 21A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112218300 (phf21ab)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
112218300 (phf21ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
DUF3736
AT_hook
PHD_2
C1_2
Seryl_tRNA_N
zf-RING_2
ADK_lid
ADDz_Dnmt3b
C1_1
Motif
Other DBs
NCBI-GeneID:
112218300
NCBI-ProteinID:
XP_024234735
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Position
LG19:7587425..7663998
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AA seq
876 aa
AA seq
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MLQLDGIQPGDGVKAERFPGLIGTLTGSMMELQTLQEALKVEIQVHQKLVAQMKQDPQNA
DLKKQLHELQAKITALSEKQKKVVEQLRKDLLVKQEPEVKVQVLATDKHVLQIPSSTTLQ
ALQQTTHTQALQQKTLTVTPVISTKTLPVVLKAATPTMPSSVVAQRPATVAMVAAISHAS
KPSIVNSNSQNTPVNLQVASKLTNQCFEPVRLVSKNALVVQATTTPTSAQPIKVPQFVPP
PRLTPRPTFQPQVRPKPVTPNNNVPIAPAPPPAMMAAPQLLQRGPVMLTTKLSSSSLTSS
AGPIHQVRIVNGQPCASAGAKSGQHTGTVTGIVITAPASARLATPKQTLQISSLSSDTKA
VKAHRGLEQKMASSTPPLSPAPRPKREDNPQKLAFMVALGLVTHDHMEEIQSRRQERKRR
TTANPVYSGAVFEPERKKSAVTYLNTPLHQGTRKRGRPPKYSSVPELGSHTPTSPSSCLT
ASLVPERPNTGGSFPFHVHPHHSLPLPSPSSGDGDIHEDFCTVCRRSGQLLMCDTCSRVY
HLDCLDPPLKTIPKGMWICPKCQDQILKKEDAIQWPGTLAIVHSYIAYKEAKEEEKQRLI
KWSAELKLEREQLEQGVKQLSNSITKCMETKNIILSRQKEMQVSLEKVKHLVRLIQAFSF
SQTMETEGTGDITEDVTKNITRAKDAIVPIENAVDTVNTEAVAEVNIQSVYGVKAKVTAQ
DSSDVEARKEEVVADVTIKMVAGVSAEPVAGVSTVATVDSRVEPVAEVNSAEEVTEAETK
TTAVVSAEDSTGVTTNGTTDLVCTDESCTNKDESCTSNTNTNHENKVTTTNNTEQVVEEE
QEENTNDDGSSTNNSKTSEPSQKSLPALLDSLDNKE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaattggatggtattcaacctggagacggtgtgaaggctgaacgtttccccgga
ctgataggcacactgactggctcaatgatggaactacaaacattacaggaggccctgaaa
gtggaaattcaagtccatcagaaactggtcgcccaaatgaaacaggacccacagaatgct
gatctgaagaagcagctccacgaacttcaggctaagatcacagcgcttagcgagaagcag
aaaaaggtggtggagcagctgaggaaggacctgctggtgaaacaggagccggaggtgaag
gttcaggtgctggctacagacaaacacgtcctccagatcccctcctccactactctgcag
gccctacagcagaccacacacacccaggccctgcagcagaagacgctgacagtcacccca
gtcatctccactaagactctacctgtagtgctgaaagctgccactcccaccatgccttcc
tctgttgtggcgcagcgccctgccaccgtcgccatggtcgctgccatcagccatgcctcc
aagcctagtatcgtcaactccaattcccagaacacaccagtgaaccttcaggtggctagc
aaattgaccaatcagtgttttgagcccgtccgactggtgtcgaagaatgcacttgtggtg
caggccaccaccacccccacctcagcacagccaatcaaagttcctcagtttgtccctcct
cctagactgacgcctcgacccacctttcaaccacaggtccgtccgaagcccgtcacgccg
aataacaacgtgccaatcgccccggcaccccctccggccatgatggcggcgccccagttg
ctccagcggggcccggtgatgctgaccaccaagttgagctcctcctcgctgacctccagc
gccgggcccatccaccaggtgcgcattgtcaacggccagccatgtgcttccgctggcgcc
aaaagtggccagcacacaggcactgtgacaggcatcgttatcacggccccggcatcagca
cgcctcgccacccccaagcagacactgcagatcagcagcctctcctcagacaccaaggct
gttaaagctcacaggggattggagcagaaaatggcaagcagcacccctcctctgtctcca
gcacccagaccgaagagagaggacaatcctcagaaacttgccttcatggttgccctcgga
cttgtcacccatgaccatatggaagaaattcaaagcagaaggcaagagcgtaagcgaaga
acaacggcgaacccggtgtacagtggagctgtgtttgagcccgagaggaagaagagtgca
gtgacctacctaaacactccgctccaccagggaaccagaaagcgaggtcgcccacccaaa
tacagcagtgttccggaactgggcagccacaccccgacctccccctccagctgtctcact
gcttccctggtccccgagcggcccaacacgggggggagcttccccttccatgtccacccc
caccactctctccccctgcccagccccagctctggggatggagacatccatgaggatttc
tgcactgtgtgcagacgcagtggccagttgctcatgtgtgacacatgctcacgtgtctat
cacctggactgcctggacccacccctgaaaaccattcctaaaggcatgtggatctgtccc
aaatgtcaagaccagatactgaaaaaagaagatgcaattcaatggccgggaacattggct
attgttcattcctacatcgcctataaagaagctaaagaagaggagaaacaaaggctaatt
aagtggagtgctgagctgaaactggagcgggagcagttggaacaaggggtcaaacaactc
agcaactctataacgaaatgcatggagaccaaaaacatcatcctgtctcgacagaaagaa
atgcaagtttcgttggagaaggtcaaacacctggtccgcctcattcaggctttcagtttc
agtcaaaccatggagaccgagggtacaggtgacatcacagaagatgtaacaaagaacatt
acgagggccaaggatgcaattgtcccaattgaaaatgctgtggacacagtcaacacagag
gctgtagcagaagtcaatatccagtctgtgtatggggtgaaggctaaggtcacagcacag
gacagcagcgatgttgaagccagaaaggaggaggttgtagctgatgttaccatcaagatg
gtagcaggagttagcgctgagcctgttgccggggtcagcaccgttgctacagtggacagc
cgtgttgaacccgtagctgaggtcaactccgctgaggaagtgactgaggccgagacgaaa
actacagcagtggtcagtgcagaggactctactggggtcacgaccaatggcaccactgac
cttgtgtgtactgacgagagctgtactaacaaggacgagagctgtactagcaacacaaac
accaaccatgagaacaaggtcaccaccactaacaacacagagcaggtggtagaagaggaa
caggaagagaacacaaacgatgatggcagcagcaccaacaacagcaaaacctcagaacct
tcccagaaatctttgccagctcttctcgacagtttggacaataaagagtaa
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