Oncorhynchus tshawytscha (Chinook salmon): 112218307
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Entry
112218307 CDS
T05605
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112218307 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112218307 (bbs4)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112218307 (bbs4)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
BBSome
112218307 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
TPR_14
TPR_12
TPR_16
ANAPC3
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_Slam
ARM_TT21_2nd
TPR_7
TPR_15
TPR_10
Wzy_C_2
NatA_aux_su
ARM_TT21_N
ARM_TT21_4th
TPR_20
PknG_TPR
ARM_TT21_C
ARM_TT21_5th
TPR_MalT
DUF2989
Clathrin
Motif
Other DBs
NCBI-GeneID:
112218307
NCBI-ProteinID:
XP_024234753
LinkDB
All DBs
Position
LG19:complement(7730316..7748365)
Genome browser
AA seq
526 aa
AA seq
DB search
MADDNPVADVQLPPASEIRKPRPKKAPELPILERRNWLIHLHYIRKDYETCKSIIKEQLQ
ETGGMCEYAVYVQALILRLEGKIQQSLDLFQSCAILNPGSSDNLKQVARSLFLLGKHKAA
IEVYNEASQLNEKDWEISHNLGVCYIYTKDFNHAEEQLNIALELSKHDLTYMMLGKIHLL
EGDTDKAIDVYRSAVEFSPENTDLLTTLGLLYMQQGKYQKAFEHLGNALTYDPNNFKAIL
AAGSMMQTHGDYDVAMNKYRVAAYAVPESSPLWNNIGMCFFGNKKYVAAISCLKRANYLS
PFDWKILYNLGLVHLTMQQYASAFHFLSAAVNLQPKMAELYMLLAVALTNMDDGENAKRS
YEQAVLLDDCNPLINLNFAVLLYNQGDKKGATDQYLEMESKVMESSHNAEFDPELIEMAQ
KLASALQVGETSVWTKPGKDSKVSQRSKTTSLQPLGTNQALGQAMSSAASKSIQLAAGSK
APPKSTSTPLDEEHDVENAPSPPLGDPESEDPKAKEKKSKSKPVAE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacaatcccgtagcggatgttcaactgcctccagcttctgaaatcaggaag
cctcgtcctaaaaaagcgcctgagctccctattttggagagaagaaactggctcatccac
cttcactacatccgtaaagactatgagacctgtaagtcaatcatcaaagagcagctacaa
gaaaccggggggatgtgtgaatatgccgtctatgtacaagctttaatccttcgcctggaa
gggaaaatccagcagtcactggacctgttccagagctgtgcaatactcaaccctggcagc
tcggataacctcaaacaagtggccagatccctatttctccttggtaagcataaggctgcc
atagaggtttacaatgaggcttcacagctcaatgagaaagactgggagatcagccacaac
ttaggtgtgtgctacatctataccaaagacttcaaccatgcagaagagcagttgaacatc
gccctggagttgagcaagcacgacctgacctacatgatgctgggaaagattcacctgctg
gaaggggacactgataaagccatcgacgtgtacagaagtgctgttgagttttctcctgaa
aacacagatcttctcaccactcttggcctgctatacatgcaacaaggcaaatatcagaaa
gcctttgaacaccttgggaatgccctgacgtatgaccccaacaactttaaggccatcctg
gcagccggcagcatgatgcagacgcatggggactatgatgttgccatgaataagtaccgc
gtggcagcttatgctgtacctgagagctcacccctctggaataacattggcatgtgcttc
ttcggaaacaagaaatatgtggcggccatcagctgtctgaagagggccaactacctgtct
ccgtttgactggaaaatcctgtacaacctgggcctggtgcatctcaccatgcaacagtat
gcctcagccttccacttcctcagtgctgccgtcaacctgcagccaaagatggcagagctc
tatatgctgctggcagttgcacttactaatatggatgacggggagaatgccaagcgatca
tacgagcaagcagtgttgttggatgactgtaaccccttgatcaatctgaatttcgcagtc
ctgttgtacaatcaaggagacaaaaaaggagccacagatcagtacctggagatggagagt
aaagtgatggaaagcagccataatgcagaatttgacccagagctcattgagatggcccag
aagttggcatctgctctccaggtgggagagacctcggtgtggaccaagccaggtaaggac
tccaaagtcagtcagcgctccaagaccacgtccctgcagcccctgggcaccaaccaggcc
cttgggcaggccatgtcttcagctgccagcaaaagcatccagctagctgcaggctctaag
gctccacccaagtccacctccacaccgctagatgaagagcatgatgtggagaatgcccct
tcccctcccctaggggaccctgagtcagaggatcccaaagccaaagagaagaagagcaag
tctaaacctgtggctgagtag
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