Oncorhynchus tshawytscha (Chinook salmon): 112218325
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Entry
112218325 CDS
T05605
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112218325 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112218325 (sin3aa)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
112218325 (sin3aa)
REST complex
112218325 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
112218325 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
DUF1846_C
Motif
Other DBs
NCBI-GeneID:
112218325
NCBI-ProteinID:
XP_024234791
UniProt:
A0A8C8FAX0
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All DBs
Position
LG19:complement(8368923..8402189)
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AA seq
1267 aa
AA seq
DB search
MKRRLEEQEPVFASQQRRLTCSTEAFQHRVLAPAPAAYEAVGDSMQPTAGNIQYSVPQGY
QVPTVPQTSSGHVHTPSPTVHHHNPAVQPHGLPVMQCHAHPPASAQGQQQFQRLKVEDAL
SYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLP
PGYKIEVATNDLVNVTTPGQIHHITPHGISVSQIPLSGPPTPHQPQVPAPTTTSAPPPPT
QPTPTKMSKQPLQSPVLTPSSQPNPSIPAYASPQSPTLQPHTPISGTPNAPPLQNNQPVE
FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA
RLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKLQLNNKQRPNQNG
CQIRMLSGTVATPPVKKKPKLLNLKDSSLVEASKHGDGTESMFFEKVRKALRNAEAYDNF
LRCLVIFNQEVISRAELVQLVLPFLGRFPELFNWFKNFLGYREMSHTERYPKERALEGIA
MEIDYASCKRLGSSYRALPKSYTQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKT
QYEEHIYRCEDERFELDVVLETNLATIRMLETVQRKLSRMSAEEQAKFRLDNTLGGSSEV
IHRKAIQRIYGEKAPDIIDGLKKNPAISVPIVLKRLKTKEEEWREAQRGFNKIWREQNEK
YYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIYDERQEQASEENTAMPSGPHLTLTYKD
SQILEDAAALIIHHVKRQTGIQKEDKYKIKQIIHHLIPDMLFAQRGELSDLEEEEEEELD
EAVAKKHNGVTQGGSPNKSSKLLFCNTGAQKLRSCTEAYNLFYVNNNWYIFLRLHQTLCS
RLMRIYGQAERQIEEDIRERDWEREVLGLKRDKNDNPAIQLRLKEPMDIEVEDYYSAFLE
MVRNLLDGNMEPAQYEDSLREMFTIHAYTAFTMDKLIQSIVRQLQHIVSDEICVQVTDLY
LAEGTNGATGGPLPTQTSRASTEGCYQRKAEQIMSDENCFKLMFLKNRGHVQLTVELLDT
EEENSDEPMEAERWSDYVGRYLSSDSTSPELREHLAQKPVFLPRNLRRIRKYQRGREQLE
KEASEGEKKSTENAENLKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHERVSTRL
HKRFQAWVDFWVKEHVTRDMAAETNKWLMGEGRDGLVPCTTTRELEILHFMNINKYRVKY
GSPFKAP
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcgcttggaggaacaggaaccggtatttgcgtcccaacagcggcgcctcacc
tgcagcacggaggctttccagcaccgtgtcctggccccggcgcctgccgcatacgaggcc
gtgggcgacagcatgcagcctaccgcaggcaacattcagtattctgtcccacagggctac
caggtccccacggtgccacagacctcgagtggtcatgtgcacacccctagcccaactgta
caccaccacaacccagcggtccagccccacgggctccctgtgatgcagtgccacgctcac
ccccctgcctcagcccagggccagcagcaattccagaggctcaaggtggaagatgctttg
tcttacctggaccaagtgaaactccagtttggcaaccaacctcaagtctacaatgacttc
ctggacatcatgaaggagttcaagtctcaaagcattgacactccaggggtgataagcagg
gtatcccagctcttcaaaggccaccccgacctcattatgggattcaacaccttcctgcca
ccgggctacaagatcgaggttgcgaccaacgacctggtcaatgtaaccacgccgggtcag
atccaccacatcacccctcacggcatttctgtctcacaaatccccctgtcgggaccaccc
accccgcaccagccccaggtgccagcccccaccaccacctctgcaccaccccctcccaca
cagccaacccctaccaagatgagcaagcagccactgcaatctccagtcctcacgccaagc
agccagcccaatccatccatccccgcctatgcctccccccaatccccaaccctgcagccc
cacacaccgatcagtggcacgcccaatgcccctccgctgcagaacaaccagcctgtggag
ttcaatcatgccatcaactacgtcaacaagatcaagaaccgtttccagggtcagccggac
atctacaaagccttcctggagatcctgcacacctaccagaaggagcagcggaatgctaag
gaggcaggagggaactacaccccagccctgacagagcaggaggtctatgcccaggtggcc
cggctcttcaagaaccaggaggaccttctctctgagtttggccagttcttaccagatgcc
aacagctcggtgctgttaagcaagacgacagcagaaaaggcggagtctgtgcggaatgac
cacggtggcacagcgaagaagctgcagctcaacaacaaacagaggcccaatcagaacggt
tgccagatccgcatgctctctgggacggttgccacaccccctgtcaagaagaagcccaag
ttactgaatttgaaagactcgtccctggtagaagccagcaaacatggagatggcacagaa
tctatgttctttgagaaggtgcggaaggccttgcggaatgcagaggcctatgacaacttc
ctgcgttgtttggttatcttcaaccaagaggtcatctccagggctgagctggtgcaactg
gtgctgcctttcctggggagattccccgaactgttcaattggttcaagaacttcctagga
taccgggaaatgtcccacactgagcgctatcccaaggagcgtgccttggagggcattgcc
atggagatcgactatgcttcctgcaagagactgggctcgagctacagagcactgccgaag
agctacacgcagcccaagtgcaccgggagaacgccactgtgcaaagaggtcctcaatgac
acctgggtgtccttcccttcctggtctgaagactccacctttgtgagctccaaaaagacc
cagtatgaggagcacatctacagatgtgaggatgaacgcttcgagctggacgtggtgctg
gagaccaacctggccaccatccgcatgctggagaccgtacaaagaaaactgtcccgtatg
tctgccgaggagcaggctaagttccgcctggacaacaccctgggaggctcctcggaagtc
atccatcgcaaggccatccagaggatatacggtgaaaaggcccctgacatcatcgatggg
ctcaagaagaaccctgccatttctgttcccattgtgctgaagaggttaaagaccaaggag
gaggagtggcgggaagcccagaggggcttcaacaagatctggagggagcagaatgagaag
tactacttgaagtctctcgaccaccaaggtatcaacttcaaacagaacgacaccaaggtg
ctacgatccaagacactgctcaatgagattgagagcatctacgacgagcgacaggaacag
gcgtcggaggagaacaccgcgatgcccagcggcccccacctgactttgacctacaaggac
agccagatcctggaggatgctgccgccctcatcatccaccacgtcaagcggcagacgggc
atccagaaggaggataagtacaagatcaaacagatcattcaccacttgatcccagacatg
ctgttcgcccagcgcggcgagctctcggacctggaggaagaagaggaagaggagctggat
gaggccgtggccaagaagcacaatggcgtcacgcaaggcggaagccccaacaagtcctcc
aagctcctcttctgcaacacgggtgcccagaagctgcgaagttgcaccgaggcctacaat
ctattttacgtcaacaataactggtacatcttcctgcggctacaccagacactgtgctcg
cggctgatgcggatctacgggcaggcggagagacaaattgaagaggacatccgggagcgt
gactgggagagagaggtgctgggcctcaagcgagacaagaatgacaaccctgccatccag
ctgagactgaaagagcccatggatatagaggtggaggactactactctgccttcctggag
atggtgcggaaccttctggatggcaacatggagccggctcagtacgaggactccctccgg
gagatgttcaccatccatgcctacaccgccttcaccatggacaaactcatccagagcatt
gtcaggcagctccagcacatagtgagtgacgagatctgtgtgcaggtgacagacctgtac
ttagcagagggcaccaacggggccaccggaggtccccttcccacccagacatccagagct
tccacagagggatgctaccagcgcaaggcggaacagatcatgtccgatgagaattgcttc
aagcttatgtttctaaagaacagaggccatgttcaactgacagtggagcttctggacacc
gaggaggagaactccgatgaacccatggaggcagagcgctggtcagattacgtgggtcgc
tacctgagttctgactctacctctccagagttgcgggaacaccttgctcagaaacctgtc
ttccttcccaggaacctccgtcggatacggaagtaccaaaggggtagggagcagctagag
aaggaggccagcgagggagagaaaaagtccacggagaatgctgagaaccttaaaatggaa
tgtatgttcaagctcaactcatacaagatggtttatgtcttcaagtctgaggactacatg
taccgacgcactgccttgctgcgagctcaccagtcacacgagagagtgagcactcggttg
cacaagcgcttccaggcctgggtcgacttctgggtgaaggagcatgtcactcgcgacatg
gccgctgagaccaacaagtggctgatgggagaggggcgtgacggcctggtgccgtgcacc
accacccgcgagctggagatcctccacttcatgaacatcaacaagtaccgggtcaaatac
ggctcacccttcaaagcaccataa
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