Oncorhynchus tshawytscha (Chinook salmon): 112218327
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Entry
112218327 CDS
T05605
Symbol
snx33
Name
(RefSeq) sorting nexin-33
KO
K17923
sorting nexin-9/18/33
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112218327 (snx33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112218327 (snx33)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112218327 (snx33)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112218327 (snx33)
Macropinocytosis
Sorting nexins
112218327 (snx33)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112218327 (snx33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_1
SH3_2
Vps5
BAR_3
Motif
Other DBs
NCBI-GeneID:
112218327
NCBI-ProteinID:
XP_024234797
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All DBs
Position
LG19:8530945..8565552
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AA seq
558 aa
AA seq
DB search
MSMKGKALYTFQSENKEEISIQENEELVIFDDNSVDGWLQGENSKGQRGLFPASYVEVIR
PRSNSNLTDCSISPVGSPGNDSSYFPSAPNTPFHMQQGYYDDDDDDWDDWDDSSTVVDDD
GRSGANGHSHQSPHSNNPNVHYRAKPYMERQDSISSSRKGSMVGRNLNRFSSFVRSGVEA
FVLGDVPMNAKIAESYTIEMGPKGPQWKESPTPFSCSIEDPTKQTKFKGIKTYISYRVTP
SHNARPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRKRRLILWMDH
MTSHPVLSQYEGFEHFLMCADDKQWKLGKRRAEKDEMMGANFMLTFQIPNEHQDLQDVEE
RVDSFKSFAKKMDDSVMQLTHVASELVRKHLGGFRKEFQRLGNAFQNVSQAFMLDPPHCS
DGLNTAISHTGRTYENIGEMFAEQPKYDLFHMLDKLSLYQGLLANFPDIIHLQKGAFAKV
KESQRMSDEGKMDQEEADGVRKRCRTVGFALQAEMNHFHQRREVDFKEMMQAYIKQQIAF
YQRVGQQLERTLHMYDNL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaaaggcaaggcactctacactttccaaagtgaaaacaaagaggagatcagc
atacaggagaatgaggaactggttatctttgacgataactctgtagatggctggttacaa
ggggagaacagtaaaggacagagaggtctcttcccggcctcttacgtggaagtaatccgc
cctcgttccaactccaacctgacagactgctccataagcccggtgggttctccaggcaat
gactcctcatatttcccctccgccccaaacacgccctttcacatgcaacaaggttactat
gacgatgatgatgatgactgggatgattgggatgacagttccacagtggtggacgatgat
ggccgcagtggcgcaaatggacattcccatcagagcccccactccaacaaccccaatgtc
cactatcgagccaaaccttacatggagaggcaggacagcatctccagctcgcggaagggc
agtatggtgggcaggaacttgaaccgattctccagctttgtccgctcaggggtggaagct
tttgtgttgggcgatgtgcccatgaacgctaagatagcggagtcgtacaccattgagatg
ggccccaaagggcctcaatggaaagaaagccccacacctttctcttgctccatcgaggac
cctaccaagcagaccaagttcaaaggcatcaagacctacatatcgtaccgagtgacccca
agccacaatgcgaggcctgtgtaccggcgttacaagcacttcgactggttgtacaaccgt
ctactgcacaagttcaccgtcatctccgtgccccacttgcccgagaaacaggcaacaggg
cgcttcgaagaggacttcatcgagaagcgcaagaggcggctgatcctctggatggaccac
atgactagccacccggtcctgtctcagtacgagggcttcgagcacttcctcatgtgcgcc
gacgacaagcagtggaagctgggcaaaaggcgggcagagaaggacgagatgatgggcgcc
aacttcatgcttaccttccagatcccaaatgaacaccaggacctgcaggacgtggaggaa
cgtgtggactccttcaagtccttcgccaagaaaatggatgacagcgtcatgcagcttaca
catgtggcctcagaactggtgcggaagcacctcggaggcttccggaaggaatttcagcgg
ctggggaatgccttccagaacgtcagtcaggctttcatgctggaccctccccactgctcg
gacggcctcaacaccgccatctcccacacgggacgtacttacgaaaacattggggaaatg
tttgcggagcaacctaagtatgacctcttccacatgctggacaaactgtcactctaccag
ggcctactcgccaacttcccggacattattcatctacagaaaggtgcgttcgccaaggtc
aaagagagtcagcggatgagcgacgaagggaaaatggaccaggaagaggcagacggagtg
cgtaaacgctgccggacagtgggatttgctctacaggctgagatgaaccacttccaccag
cgccgcgaggtggacttcaaggagatgatgcaggcctacatcaaacagcagatcgccttc
taccagcgcgtaggccaacagctggagcgtaccctgcacatgtacgacaacctgtag
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