Oncorhynchus tshawytscha (Chinook salmon): 112218346
Help
Entry
112218346 CDS
T05605
Name
(RefSeq) lissencephaly-1 homolog B
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00565
Ether lipid metabolism
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
112218346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112218346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112218346
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112218346
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112218346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_SPT8
LisH
WD40_RFWD3
LisH_PAC1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
DUF7800
Motif
Other DBs
NCBI-GeneID:
112218346
NCBI-ProteinID:
XP_024234823
UniProt:
A0AAZ3PEZ2
LinkDB
All DBs
Position
LG19:complement(10230545..10263257)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIGDYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagagacaacgagatgaactaaaccgagcgataggagactacctccgc
tccaacggctatgaagaagcctattccaccttcaagaaagaggcagagttagatatgaat
gaggagttagataagaagtacgctggtcttttggagaagaaatggacctctgtcatcaga
ttacagaagaaggtgatggagctggagtctaagctgaacgaggccaaggaggagatgact
ctagggggtcctgtggcccagaagagggatcctaaggagtggatcccccgtcccccagag
agatacgccctaagcggccaccgctcccccgtcacacgggtcatcttccacccggtcttc
tctgtcatggtcactgcttctgaggacgccaccatcaaggtgtgggactatgaggcaggg
gactttgagaggacactgaagggtcatacagactctgtccaggacatctcctttgaccag
acgggcaagctgctggcctcctgctctgcagacatgaccatcaagctgtgggactttcag
ggctttgagtgcatccgcaccatgcacggtcatgaccacaacgtgtcttctgtagccatc
atgcccaatggagaccacatagtctctgcctccagagacaagaccatcaagatgtgggag
gtggccactgggtattgtgtgaagacattcacaggccacagagaatgggtgaggatggtc
cggcccaaccaggatggttctcttatcgccagctgttccaacgaccagacggtgcgtgtg
tgggtggccacctccaaggagtgtaaggctgagctgcgggagcacgaacacgtggtggag
tgtattgcctgggcccccgataccgctcaccccactatcctggaggctactggctcagag
agtaagaagagtgggaagcccggcccattccttctctctggctctagagataagaccatc
aagatgtgggacatcagcactggcatgtgccttatgactctggtgggtcatgataactgg
gtgcgtggtgtgttggtgcaccctgggggcaggttcatagtgagctgtgctgatgataag
actctgaggatctgggactacaagaacaagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatatgcaccggactgctccctacgtggtgacaggcagcgtt
gatcagacagtcaaagtgtgggagtgtcgctga
DBGET
integrated database retrieval system
