Oncorhynchus tshawytscha (Chinook salmon): 112218374
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Entry
112218374 CDS
T05605
Symbol
hmg20a
Name
(RefSeq) high mobility group protein 20A isoform X1
KO
K24660
high mobility group protein 20A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112218374 (hmg20a)
03036 Chromosome and associated proteins [BR:
otw03036
]
112218374 (hmg20a)
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
112218374 (hmg20a)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
112218374 (hmg20a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CCDC39
DUF4763
MlaC
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
112218374
NCBI-ProteinID:
XP_024234875
UniProt:
A0A8C8G703
LinkDB
All DBs
Position
LG19:12042253..12068417
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AA seq
290 aa
AA seq
DB search
MEEQTGSPGNTDNSSQRNEEEKPRRSSWTKGRKRKKPVKDSNAPKAPLTGYVRFMNDRRE
QLRAERPDVPFPEITRMLGNEWSKLPPEDKQRYLDEAERDKERYMRDLEKYQKTEAYKHF
TRKVQEKQKVKRHRGDGGHQVANESLHEKDTEGKERSVFDIPIFTEEFLNHSKAREAEMR
QLRKTNMEYEERNAALQKHVESMRGAVERLDGDVRQERGRNGLLQQHLETLRQALTSSFS
SVALPVSGETPTLDTIDSYMKKLHGIILSNPQEHDNLIGTVREVVNRLDR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcagacaggctcacctggtaacacagacaacagcagccagagaaatgaagag
gagaagcccaggcgcagcagctggaccaagggccgtaagaggaagaagccagtgaaggac
agcaacgcccccaaggcaccgctgacgggctatgtgcgcttcatgaacgaccggcgtgag
cagctgagggccgagcggcctgacgtgcccttcccagagatcactaggatgctgggcaat
gagtggagcaagctgccgccggaagacaagcagcgctacctggacgaggcggagagggac
aaggagcgctacatgcgtgacctggagaagtaccagaagacggaggcctacaagcacttc
acccggaaggtgcaggagaaacagaaggtcaagaggcaccggggagatggcgggcaccag
gtagccaatgaatctcttcacgagaaggacacagaaggcaaggaaaggtctgtgttcgac
attcccatcttcacagaggagtttctcaaccacagcaaagcacgggaggcggagatgcgt
cagctgcgcaagaccaacatggagtatgaggaacgcaacgcggcactgcagaagcacgtg
gagagcatgcgcggcgccgtggagcgcctggatggcgacgtgaggcaggagaggggacgc
aacgggctgctccagcagcacctggagacccttcgccaggccctgaccagcagcttctcc
tctgtggcccttcctgttagtggggagacccccaccctggacaccatcgactcctacatg
aaaaagctccatggtatcatcctgagtaacccgcaggagcacgacaacctcatcggcacc
gtaagagaggtggttaaccggctggacaggtaa
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integrated database retrieval system
