Oncorhynchus tshawytscha (Chinook salmon): 112218396
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Entry
112218396 CDS
T05605
Symbol
spty2d1
Name
(RefSeq) protein SPT2 homolog isoform X1
KO
K15193
protein SPT2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112218396 (spty2d1)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112218396 (spty2d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPT2_N
SPT2
Motif
Other DBs
NCBI-GeneID:
112218396
NCBI-ProteinID:
XP_024234922
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All DBs
Position
LG19:complement(14499091..14515126)
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AA seq
717 aa
AA seq
DB search
MDFENVLSIASQNQGLSSVPKRYSLQTGPPKKDPKVKGVNSAAVQAFLKKQEMESKKKEA
MSMKKKEGLLAKRVELKSDRKARAMASRTKDNFRGYNGIPVVEEPKKRRSKGERGEEQQR
SDTYDEDDEDTYEYAQTDSEPESEPDPEPQIPRQAVPNSKPSKRPSGPSKPAPLPMNFAE
LLKLAQKKQFEPVEVKAKPSKKGEPERLRTADEIRELDLERKAKRLDKGSRDSRPQERER
DRDGDIDRNRDRRDKSQASSSSSRKSTSDRDVRNGKQPHKSLSERPVPSGSGRKPKPLLP
SCSSSERSHHGSAKPSQDRDRDRDRERSKAKPSQSSSSSLSGALSRKAPTKGASSQVSAK
TPTPRPTSAGHKPTATSDLNTPRKGNASLTPGRPGSSGMRPSTALSSVQARPQGLGQSRP
QQGGSLGQARASQGSSVRGGPTGGPSRPGKGVPARPGGSSTARPASNEQMRPTAVGPLRP
GGPPQAKPGGGGVQGRPGGGGVRPPGNAPSRPGGGGPVPRRPASSMGSGPGRPKCTLVAE
TISSKTFGGGRGAPPSRPGMPPSRPGMPPSRPGMPPSRPGMPPSRPGMPPSRPGMHPSSM
MRPQGMIRSPITSAYKRKYEDEEDEEYDSEMEDFIDDEGEDQDTVSKHIKEIFGYDRTKY
KEESDYALKFMESSWRDQQKEEARSLRLGIKEDEEELRLEEEEMKKKMSMNAKRKKV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgaaaatgtcttgtcgatcgcctcccaaaaccagggcctcagtagtgtaccg
aagcggtacagtttacaaactggaccacccaaaaaggaccctaaagtgaaaggtgtcaac
tcagcagctgtgcaggctttcctaaagaaacaagagatggagagtaaaaagaaagaggcc
atgagtatgaaaaagaaagaggggcttctcgccaaaagggtggagctaaagtctgaccgc
aaggctcgagcgatggcatcccgaaccaaggacaacttcaggggctacaacggcatccct
gtggtggaggaacccaagaagaggagatcaaagggggagaggggcgaagagcagcagagg
agtgacacttacgacgaagatgatgaggacacgtatgaatatgcgcagactgactctgag
cccgagtcagaaccggacccggaaccccagatacccagacaggctgttcccaactccaag
ccctcaaagagacccagcggaccatctaaacccgcccctctacccatgaactttgccgag
ctgctcaaactggcccagaagaagcagtttgagccagtggaggtgaaagccaagccgagc
aagaagggagagccggagaggctgcggacggccgatgagatacgtgagctggacctggaa
cgcaaggctaagcggcttgataaaggtagcagagactccagaccccaggagagagaacga
gatagagatggggacatagataggaacagagatagaagagacaaatcccaggccagctca
agctcctcaaggaaaagcacttctgacagagatgtaaggaacgggaagcagccacacaag
agcttgtcggagaggcccgtccccagtgggtcggggaggaagccaaagcccctgctgcca
tcttgctcgtcgagcgaaagaagccaccatggttctgccaagccgtctcaggacagagac
agagaccgagatagagaaaggtccaaagcaaaaccttctcagagctcctcttccagcttg
tcaggtgccttaagcagaaaagcccccaccaaaggagcctcctctcaggtctcagccaaa
acccccacacccaggcccacttcagcaggccacaaacccactgccacaagtgaccttaac
acccccaggaagggaaacgcctcactaactccagggcgacccggcagctccgggatgaga
cccagcacagctctgagttccgtccaggctagaccacagggtttgggccaaagcaggcca
cagcaagggggctctttggggcaggctcgagccagccagggcagctcagtgaggggagga
cccaccggaggaccctccaggcccggaaagggagtaccggcacgacctggtggtagctcc
acggcaagaccagcgagtaacgaacagatgagacccactgcagtcggtcctctcaggcca
ggagggccacctcaggccaagccgggtggaggtggtgtccaaggtcgccctggtggcgga
ggggtcagacctccagggaacgcacccagtcggcctgggggtgggggacccgtgcccagg
cggccagccagcagtatgggctccgggcctgggagacccaaatgcactttggtggccgag
accatctcatccaagacctttggtggaggcaggggagcgccacctagtaggccaggcatg
ccacctagtaggccaggcatgccacctagtaggccaggcatgccacctagtaggccaggc
atgccacctagtaggccaggcatgccacctagtaggccaggcatgcatcccagctcaatg
atgagacctcaaggcatgattcgttcaccaatcacctcggcctacaagaggaagtatgag
gacgaggaggacgaggagtatgactctgagatggaggacttcatcgacgatgaaggggag
gaccaagacacagtctccaaacacatcaaggaaatctttggctacgaccggaccaaatac
aaagaggagagtgactatgcattaaaattcatggaaagcagttggagagaccagcaaaaa
gaggaggctaggagtttacgcctgggtatcaaggaggatgaggaagagttgcgcttggag
gaggaagagatgaaaaagaaaatgtcaatgaatgcgaaacggaaaaaagtttga
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