Oncorhynchus tshawytscha (Chinook salmon): 112218504
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Entry
112218504 CDS
T05605
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04115
p53 signaling pathway
otw04120
Ubiquitin mediated proteolysis
otw04137
Mitophagy - animal
otw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112218504 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112218504 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112218504 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
112218504 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112218504 (siah1)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112218504 (siah1)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112218504 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
112218504
NCBI-ProteinID:
XP_024235113
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All DBs
Position
LG19:24566997..24591226
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AA seq
335 aa
AA seq
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MSGRADVQPMNSWKGVLKLFTCIASRTTANKPKELPIFQEKKKALFGNLMDEEMSRQTAT
ALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRP
KLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYS
CPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGI
ATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctgatgttcagcccatgaactcatggaagggggtgctcaagctcttc
acatgcatagcttctagaacaactgccaacaaacccaaagagttacccatttttcaagag
aagaagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccaca
gcgctgcccacaggaacctccaagtgcgccccctcccagcgcgtccccaccttgtccggc
actacggcctctaacagtgacctggccagcctgtttgagtgccctgtctgcttcgactat
gtgctgccccccatcctgcagtgccagagtggccacctggtctgcagcaactgccggccc
aagctcacctgctgccccacctgccggggcccgctgggctccatcaggaacctggccatg
gagaaggtggccaactctgtgctgttcccctgcaagtatgcgtcgtcgggctgtgaggtg
acgctgccccacacagacaaggcagagcacgaggagctgtgtgagttccggccatactcc
tgcccctgcccaggggcctcctgtaagtggcagggctcgttggacgcggtcatgccccac
ctcatgcaccagcacaaatccatcaccacactgcagggcgaggacatcgtgttccttgcc
acggacattaacctgcctggggcagtggactgggtcatgatgcaatcctgcttcggattc
cacttcatgctggtcctggagaagcaggagaagtacgacggtcaccagcagttctttgcc
attgtgcagctgatcggcacacggaagcaggcagaaaactttgcctaccgcctggagctc
aacgggcaccggcgacggctcacctgggaggccacgccccgctccatccatgagggcatc
gccactgccattatgaacagcgactgcctagtgtttgacacctccatcgcgcagctgttc
gctgagaacggaaacctgggcatcaacgtcaccatatccatgtgctga
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