Oncorhynchus tshawytscha (Chinook salmon): 112218512
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Entry
112218512 CDS
T05605
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112218512 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112218512 (exosc6)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112218512 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112218512
NCBI-ProteinID:
XP_024235124
UniProt:
A0A8C8CTD7
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Position
LG19:24751777..24753370
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AA seq
277 aa
AA seq
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MPTDTKRVRGPEVSQSPSLFLCKNAVKKSTAANDARVDGRQRGQVDVRSVFVRCGLISQA
KGSAYIEAGNTKLICCVYGPRETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEK
DLSLMLLESLRPGVCLQKYPRSQIEVNVMVLENDGAVLAHAVTCASMALADAGIEMYDLV
LGCSIRQEGATYLIDPTLLEENGYNLASGSRENLGSLTVAFLPSLNQISGLQSDGEMGED
TLTGDVRTCIEGCFKLYPVIQQALSKAVRRKAPPSES
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgatacaaaaagggtacgtggcccagaagtgtctcaaagtccatctctcttt
ctgtgtaaaaacgcggtaaagaagtccaccgctgccaacgacgccagggtagatggcagg
cagcgtggtcaagtggatgtccgttcagtttttgtccgatgtgggctgataagtcaagcc
aaaggttcagcttacattgaagctgggaacacgaagctcatctgctgtgtgtatggaccc
agagagactgagcgcaaggatgagaccgatatgaaatccggaagactgattactgacatg
agatttgccccattctcttgtcgagagagaggctcgtggattcaaggtagcgatgaaaag
gatctgtcactgatgctgttggagagcctgaggccaggagtgtgcttgcagaagtatcct
cgctctcagattgaagtaaatgtaatggtccttgaaaacgacggcgccgtcctggcacat
gcagtcacctgtgcgtcaatggcgctggcggacgcaggtatagagatgtacgatctggtt
cttggatgctcaatccgtcaggaaggtgccacataccttatcgaccctacccttctggag
gaaaatggatacaacttggcctcaggatccagggagaatttgggaagcctgacagttgca
tttctgcccagcctgaaccagatttctggactacaatcggatggcgagatgggcgaggac
accctgactggggatgtgcgcacatgcattgaggggtgtttcaaactctaccctgtcatt
cagcaagcactgtccaaggcagtacgaagaaaagcaccaccatcagagagctga
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