Oncorhynchus tshawytscha (Chinook salmon): 112218539
Help
Entry
112218539 CDS
T05605
Name
(RefSeq) partitioning defective 6 homolog alpha
KO
K06093
partitioning defective protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112218539
09144 Cellular community - eukaryotes
04530 Tight junction
112218539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112218539
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112218539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
L51_S25_CI-B8
Motif
Other DBs
NCBI-GeneID:
112218539
NCBI-ProteinID:
XP_024235175
LinkDB
All DBs
Position
LG19:25720444..25758581
Genome browser
AA seq
408 aa
AA seq
DB search
MVLSTGVQRANMSRYQRTPLKNTDNVVEVKSKFEAEYRRFALKMSGTCGFQEFYRLLQTV
HHIPGVEVLLGYADIQGDLLPINNDDNFYKALSSANPLLRIIIQKRDVDEPVVFATNSLQ
RRKKGLAGLRPAQQKAKPGLMIGLPQDFRQISSIIDVDILPETHRRVRLHKHGTHKPLGF
YIRDGVSMRVTPQGVEKVPGVFISRLVRGGLAESTGLLGVNDEILEVNGIDVAGKSLDQV
TDMMVANSHNLIVTVKPANQRNNVVPRASRVSAGGNSSSGSVGSAFSHDSAPSTASQSVS
HHSNSNSVAEGDSDEDGDGDLIIETDSLPPYLPHRCVSNGNGSHRESPLSSSLGQRPLPQ
SMSLPSSGSLSDSKASLSSMTTPTHNGSPTKTSSSQESMREDGNIITL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggtcctatccactggggttcaacgcgctaacatgtcaaggtaccagaggacccccttg
aaaaacactgacaatgtggtcgaggtcaagagcaaatttgaggcggagtacagacgtttc
gctttgaagatgagtggcacctgtggctttcaggagttctaccggctgctgcagaccgtt
caccacatccccggtgtggaggtgctgctgggatatgctgacatccagggtgacctgctg
ccaatcaacaatgatgacaacttctacaaagccctctcctcagccaacccactactcagg
atcatcatccagaagagagatgtggatgagcctgtggtctttgccaccaactccctgcag
aggaggaaaaaaggcctggcagggttgcgcccggcgcagcagaaggccaaaccaggcctg
atgattggccttccccaggatttccgccagatctcctccatcatcgatgtcgacatcctg
cccgagacacaccggcgtgtccgcctgcacaagcacggtacccacaagcccctgggtttc
tatattcgggacggcgtgagcatgcgggtcacgcctcagggcgtggagaaggtgcctggt
gtcttcatctcgcggctggtgcgtggaggcctggctgagagcacaggcctgctgggggtc
aacgatgagatcctggaggtcaacggcattgatgtggccggcaagtctttggaccaggtg
acagacatgatggtggccaacagccacaacctgatcgtgacggtgaagccagccaaccag
cgcaacaacgtggtgccccgggcaagcagggtctcggcaggggggaacagctcctctgga
tccgtaggctccgcattctcccatgactcagcccccagcactgcctctcagagtgtcagt
caccatagcaacagtaacagcgtggcggagggcgacagcgacgaggacggagacggagac
cttatcattgagactgacagcctgccaccttacctgccccatcgctgtgtgtccaatggt
aacggcagccacagagagtctccattgtcctcgtcactggggcaacggcccctcccccag
agcatgtccctgcccagcagcggctctctgtcagacagcaaggcctccctgagctccatg
accacccctacacacaacggcagccccaccaagaccagcagcagccaggagagcatgaga
gaggatgggaacatcatcacactgtaa
DBGET
integrated database retrieval system
