Oncorhynchus tshawytscha (Chinook salmon): 112218565
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Entry
112218565 CDS
T05605
Name
(RefSeq) COUP transcription factor 2 isoform X1
KO
K08548
COUP transcription factor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112218565
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112218565
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
112218565
Nuclear receptors [BR:
otw03310
]
2. Hepatocyte nuclear factor 4 like
2F. COUP-TF like receptor
112218565
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
112218565
NCBI-ProteinID:
XP_024235220
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All DBs
Position
LG19:complement(26987107..26993961)
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AA seq
421 aa
AA seq
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MAMVVWRGSQDDVAETQGTLSSQSQGGLSLPTPQLNLSGSQVAPPTPQTPVQGPPNNTVQ
STPTNQTTQSEKQQPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANR
NCPIDQHHRNQCQYCRLKKCLKVGMRREVSLFTAAVQRGRMPPTQPHHGQFALTNGDPLH
CHSYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFF
PDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIR
IFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQY
PNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSI
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagtgtggagaggctcccaggacgatgtggctgagacccaaggtaccctt
tcttcgcaatctcaaggaggactatcccttccgacccctcagttgaatctgtcaggctct
caggtcgcccctccgacccctcagacaccagtccaaggacccccgaacaacactgtacag
tctacgccgacaaaccagacgacgcagtcggagaaacagcagccacagcacatagaatgc
gtggtttgcggggataaatctagtggtaaacactatggccagtttacttgcgaggggtgc
aaaagcttcttcaaacggagcgtacgaaggaacctcagttacacatgccgtgccaacagg
aattgtcccattgaccagcaccatcgcaatcagtgtcagtactgccgcctcaaaaaatgc
ctgaaagttggcatgagacgggaagtttctctttttactgcagcggtgcaacggggacgg
atgccacccacacagccacaccatggccagttcgccttgacaaatggggacccactccac
tgccattcctacttatccggatatatctctctactgctgagagcggagccctacccaacg
tcccggtatggcagtcaatgcatgcaacccaacaacatcatgggcatcgagaacatatgt
gaactggcggccaggatgctgttcagcgccgtggagtgggccaggaatatccccttcttt
ccagaccttcagattactgaccaggtggctcttctgcggttgacctggagtgagttattt
gtgctcaacgccgcacagtgctccatgcctctccatgtggctccacttctggcggcggct
ggcctacatgcctcccccatgtctgcggacagagtggtcgcatttatggaccacattagg
atcttccaagaacaagtggaaaagctgaaagctttgcacgttgactctgctgaatacagc
tgcttaaaggcaattgtgctcttcacatcagatgcttgtggcctctcagatgtggcccat
gtggaaagtttgcaagagaagtcacagtgcgccctggaggaatatgttcggagccagtat
cccaaccagcctacacgatttgggaagttgttacttcgcttgccttcgctgcgcacagtc
tcttcatcggtcatagagcaattgtttttcgtccgattggtaggtaaaaccccaattgaa
accctcatcagggatatgttgctttcggggagcagttttaactggccctacatgtcaatt
cagtaa
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