KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112218576
Entry
112218576         CDS       T05605                                 
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04260  Cardiac muscle contraction
otw04261  Adrenergic signaling in cardiomyocytes
otw04814  Motor proteins
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    112218576
   04820 Cytoskeleton in muscle cells
    112218576
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    112218576
   04261 Adrenergic signaling in cardiomyocytes
    112218576
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:otw04812]
    112218576
   04147 Exosome [BR:otw04147]
    112218576
Cytoskeleton proteins [BR:otw04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     112218576
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   112218576
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ DUF745 ATG16 Crescentin PUMA_CC TMF_DNA_bd Lebercilin CENP-F_leu_zip EzrA DUF3450 DUF16 KH_DEAH11_2nd Laminin_I FPP SlyX Fez1 FH2 TMP_N
Other DBs
NCBI-GeneID: 112218576
NCBI-ProteinID: XP_024235241
LinkDB
Position
LG19:28617043..28630444
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDDLVALQKKLKGTEDELDKY
SESLKDAQEKLEVAEKTATDAEADVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQDIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDNALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagctcgag
gatgacttggtagctctgcagaagaagctgaagggaacagaggatgagttggacaagtac
tccgagtctcttaaggatgcccaggagaaacttgaggtggctgagaagacagccacggac
gctgaggccgatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggcaactgccctgaccaagctggaggaggctgagaaggcggct
gacgagtccgagagaggcatgaaggtcattgagaacagggcctccaaggatgaggagaag
atggagctgcaggatatccagctgaaggaggccaagcacatcgctgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgatctggaacgtacagaa
gagcgcgccgagctttcagaaggcaaatgctctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggctgagaagtactcacagaaggaggacaag
tacgaggaggagatcaaggtcctcactgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtagccaaacttgagaagaccatcgacgacttggaagatgagttg
tatgcccagaaactgaagtacaaggcaatcagcgaggagctggacaacgccctcaacgac
atgacttccatataa

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