Oncorhynchus tshawytscha (Chinook salmon): 112218581
Help
Entry
112218581 CDS
T05605
Symbol
scaper
Name
(RefSeq) S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112218581 (scaper)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112218581 (scaper)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
zf-met
Motif
Other DBs
NCBI-GeneID:
112218581
NCBI-ProteinID:
XP_024235254
LinkDB
All DBs
Position
LG19:complement(28728729..28851461)
Genome browser
AA seq
1479 aa
AA seq
DB search
MSKDSRHDGRRRGAGQHRLGPRIGQGQGGDGRERSGSNSSGSSHGGGKSRNTPITVVSKA
SFQRSNSHDKVRRIVAEEGRAARNLIAWSVPLENKEEEGKSKTHTNTHLRNQRINSGLHR
NKKQNAGLDSKSTAGALLEKGAEKSPSKARQPRKVDLRARYWAFLFDNLRRAVDEIYVTC
ESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQNRPTSLAWEVRKMSPGRH
VLPSPSSDRMVPSPSARRALNFGGPPPTLAVARLSHTGPSWAERVKSSQSLPVPSQPNTC
PVEKPGKKDSEGWETVQRGRPARPRSAIIVAKVSPVLAHISPNDDSNKENQQLLGRSCPL
DKDTGHCEQTIPEEPVPLEETAEDLEKGNMEPPADSVQDSGQCVDTPREDTPPPIPAPTP
SLTQAEDPTPSATLSLPAPVLSLALPPSLDTAQMDGPSALGNKGAARGASQSMAASAPGQ
AETPMAAVKLESVLDPTELSTPQSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTRE
IQAENNDLETDNESDFSASIGSGGGLNMDWSDMLADYDAREPWRQSTSWGDIVEEEPSRP
PGHGIHMHEKLSSPSRKRTIAESKKKHEEKQLKAQQLREKLRDEKTHKLQKLLEREKEVR
KWKEELLDQRRRMMEEKLLHAEFKRELQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHD
VLAKLNEYEQRLNELQEERGRRQEEKQARDEAVQERKRALEAERQARVEELLMRRKEQDA
RIEQQKQEKERAREDAARERARDREERLAALSAAQQEAMEELQKKIQMKHDESSRRHMEQ
IEQRKEKAAELSSGRHANTDYAPKLTPYERTKQCSLCNVVITTEVHLYSHTKGKRHQQAV
RDSSSIQGRELSDEEVEHLSLKKYIVDIVTDSTVSSESVKDGEERQKARKKAKKLRGRMN
SRAKEYETSMEAKTQVPDSPYKAKLQRLVKDLVKQLQGQDSGQWANTRVSGLDRTLGEIS
RILEKQNNADQVAFQVGGGLSALEQILLVVTAASTPTAVPRIPIKSLCAAVNIYFLACSR
CHLNCSYVLFSNKVASLMDLLLHQLTLFVPDEDKSIFGRSVNKQVFEGLTTGLLQTSATI
LSLILPYVPECGRGDAPRILSPDTKTKTSPMEPFNTRAHDLISYVVNMGLIDKLYGCFLS
VQGPVDESPKMSTFLHQATALLHAMCKLCFAVTGRSPSIFDNKRADPTGLTALLQSTDLV
GVVHTLYCILLHSSSLPEPAAQSPQEPYAPGVIQVALTGLRFLNSFALLDLSAFQTVLGA
EGLSLAFRHIVSSLLWYCSQLSSEELLQEVIICVGYFTVNHPDNQVIVQSGRQPSVLQKL
CQLPFQYFSHPRLIKVLFPSLISACYNNPQNKVILQQEMSCVLLATFIQDCASSENHPDN
RTQQADKVSQLLDYCELSNRFPRDQWDSALQFFLKKQED
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagacagtcgccacgatggacgacggcgtggcgctggtcaacaccgactcggc
cctagaattggacaagggcaaggcggagacgggagggagaggtctggcagcaacagctct
ggatcctcgcatggaggagggaaaagcaggaatactcccataaccgttgtctcgaaggca
tcctttcagcgctcaaacagccatgacaaggtgcggaggattgttgcagaggagggccgt
gctgctagaaatctcattgcctggagtgttcctctagagaacaaagaggaggaagggaag
tccaagactcataccaacacccatttgaggaaccagcggatcaactctggtctgcacagg
aataagaaacagaatgcaggcctggacagcaagagtacagccggcgccttgcttgaaaag
ggagcagagaagagcccctccaaagccaggcagccgcgcaaggtggacctgcgagcacga
tactgggccttcctcttcgacaatctgcggcgggccgtggacgagatctatgttacctgt
gaatctgaccagagtgtggtggagtgcaaggaggtgctgatgatgttggacaactatgtg
cgggactttaaagctctcatcgactggatccagctgcaggagaagttagagaaaacagat
gcccagaacagacccacgtctttggcttgggaagtgcgtaaaatgtccccaggtcgtcat
gtgttgcctagcccctcatcggacagaatggtcccttctcctagtgctcgccgtgccctc
aactttggtggtcctccacccacactggcggtagctcgtctgtcccacacgggccccagc
tgggctgagcgtgtcaagtcctcccagtctctccctgtccccagccagcccaacacgtgt
cctgtagagaaaccaggtaagaaggactctgagggctgggagacagtccagcgtggacgt
cctgctaggcctcgctctgccatcatcgtagccaaggtcagcccggtcctggcccacatc
agccctaacgacgacagtaacaaggagaaccaacagctccttggcaggtcctgccccctg
gataaagacacaggtcactgtgaacagacaatccctgaggagcctgtcccacttgaggag
actgcagaagacttggagaagggtaacatggagcccccagcagacagtgtgcaagactcg
gggcagtgtgtcgacacaccccgtgaggacacgcctccgcccataccagccccaacccct
tctcttacacaagctgaagaccctaccccctctgcaaccctatccctaccagctccagtc
ctttccttagccctccctccgtccctagacacggcccagatggatgggcccagtgctctg
gggaacaagggggctgccaggggtgcgtcacagagcatggcagcatctgctccaggacag
gctgagactcccatggcagcggtgaaactggagagtgtgctggaccccacagagctttcc
actccccagtccatggcagaggtcctggctaagaaggaggagctggctgaccgcctggag
aaggccaacgaggaggctattgccagcgccatcgctgaagaggaacagctgaccagagag
atccaggctgagaacaatgacctggagactgacaacgagagtgacttctctgccagcatt
ggcagtggaggtggactcaacatggactggagtgacatgttagccgattatgacgcgagg
gagccctggcgtcagagcacctcctggggggacatcgtggaggaggagccttctagaccc
cctggccatggaatccacatgcacgagaaactgtcctcaccgtctcgtaaaagaaccatt
gcggagtctaagaagaaacatgaggagaaacagctgaaggcccagcagctccgagagaaa
ctgcgggatgagaagacccacaagctgcagaagctcctggagagggagaaggaggtcagg
aaatggaaggaggagttgttggaccagcggcggaggatgatggaggagaagttactccat
gcagagttcaagcgggagctgcagctccaggccatagtaaagaaggctcaggaggaggag
gccaaggtgaatgagatagcattcatcaacactctggaggcacagaacaagaggcacgac
gtgctggctaagctgaacgagtacgagcagcgcctcaacgagctgcaggaggagagaggc
aggagacaggaagagaagcaggccagagacgaggctgtacaggagcgtaagcgtgctctg
gaagcagagagacaggcgcgtgtggaggagctgctgatgaggaggaaggagcaggatgcg
cgcatcgagcagcagaagcaggagaaggagagggccagggaggacgctgcacgagagagg
gccagagaccgagaggagcgtctggctgccctcagcgctgctcaacaggaggccatggag
gaactgcagaagaagattcagatgaagcacgatgagagcagtcgcaggcacatggagcag
attgagcagaggaaagagaaggcagcagaactcagcagtggcagacatgccaacactgac
tatgcccctaaactgacaccatatgagcgcacgaaacagtgctccttgtgcaatgttgtg
atcaccacggaggtgcacctgtacagccacaccaagggcaagaggcaccagcaggctgtg
agagacagcagtagcatccagggacgggagctctccgatgaggaagtggagcatctttcc
ttaaagaagtacatagttgacattgtgacggacagcactgtctcctctgagagtgtgaag
gacggagaggagaggcagaaggcacgcaagaaggcaaagaagctccgcggacgcatgaac
tccagggcaaaggagtacgagacatcaatggaggcaaagacacaagtccccgactcccca
tacaaggccaagctccagcgtctggtgaaggacttggtgaagcagctccagggccaggac
agcgggcagtgggccaacactagggtgtcaggcctggacagaaccctgggagagatctcc
cgcatcctggagaagcagaacaatgcagatcaagtggcgttccaggtgggcgggggactc
tctgctctggaacagattctgctggtcgtcactgcagcctccacccccaccgcagtccca
cgcattccaatcaagtccctatgtgctgctgtaaacatatactttctggcatgctctcgc
tgccacctcaactgctcctacgttctattcagcaataaggtagcctccctcatggacctg
ctgctgcatcagctcacactgttcgtcccagatgaagacaagtccatcttcggtcgcagt
gtgaacaagcaggtgtttgaggggctgaccaccggcctgctgcagaccagcgctaccatc
ctgagtctcattcttccctatgttcccgagtgtggccgcggagacgcccctcgcatccta
tcaccagacaccaagaccaagacctcccctatggagccattcaacacccgggcccatgac
cttatcagttatgtggtgaacatgggtctgattgacaagctgtacggctgcttcctgtct
gtccagggcccagtggacgagagccccaagatgtccaccttcctccatcaggctaccgct
ctgctgcacgccatgtgtaagctgtgcttcgctgtaactggccggtctcccagtatattt
gacaacaagcgcgcagaccccacaggactgacagccctgctgcagtccacagacctggtg
ggtgtggtgcacactctgtactgcatcctgctccacagctcctccctgcctgagccggct
gcccagagcccacaggagccctacgcccccggggtcatccaggtggccctaacaggcctc
cgcttcctcaacagcttcgccctgctcgacctgtctgccttccagactgttctaggtgcc
gaggggctgtcccttgccttccgccacatagtgagctccctgctgtggtactgctctcag
ctctcctctgaagagctgctgcaggaagtcatcatctgtgtgggctacttcactgtcaac
caccctgacaaccaggtgatagtgcagtctggccgccagcccagtgtgctgcagaaactg
tgtcagctgcccttccaatacttcagccacccgcgcctcatcaaagtgctcttcccctca
ctcatctcagcctgctacaacaacccccagaacaaggtcatcctgcaacaggagatgagc
tgtgtgctgctggccaccttcatacaggactgtgcctcaagcgagaaccatccagacaac
agaacgcaacaagcagacaaagtgtctcagctgctggattactgtgagctatccaaccgc
tttcctagagaccagtgggactcggcactgcagttcttcctcaagaagcaggaggactaa
DBGET
integrated database retrieval system
