Oncorhynchus tshawytscha (Chinook salmon): 112218588
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Entry
112218588 CDS
T05605
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X11
KO
K03260
translation initiation factor 4G
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112218588
03012 Translation factors [BR:
otw03012
]
112218588
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112218588
mRNA cycle factors
Stress granule specific factors
112218588
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112218588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
112218588
NCBI-ProteinID:
XP_024235270
LinkDB
All DBs
Position
LG02:complement(26745825..26814870)
Genome browser
AA seq
1796 aa
AA seq
DB search
MSLPAKIVPKPATVAVSGPGTGPSPSSQLRATLTSVSLPSGAPGAPQLNTLPPPQIFLNM
TRPRFSRVQPSLDDRIFPTQPGVAAVYSVPRHPGPPYTAHDYTKGHPNLAGTPPGHAHSQ
ALSQVSLPTASPYRYPKGWEAGGVSPYTTGQNSGSAPLVYSPQTQQMNTQPQSRPSSMPS
PSPSPPVMWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNAPSMRPCSQNPTS
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQQFSVQPPGSGTFYPGPGP
GEYPAQYAPGPQYYPGQQVYPPSPSIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQQQPGGSQTPEQSQGQANSAYSLELPQQPQQQL
TPGAAASKPGPVDDKPKLELLVQKSSSPGLGQSEPSLERREASASVTAPSPHLDPELPSP
APVVVSPILAPLPVAGPIEQPSAVEPTAPPPSAADPKHLPLTTQSQTSNTEELLPEAPRT
LAASPALTPKALNGHADTGAEMDTQSQEHYPLAPSLSPTQPQASAPASREDCSEAVPSEV
RAEMPPAVMDPIAPITVMPVTLTSSPAPAVPAPPPGLPPLVQATAETSKLSDTKDIPLKA
GTERLITPNSKLEPQLQALFRKSPTTVCQTVPATPKTWKKPNEGSPVGDASQRETEDELK
PVEEAAGDQALQPARPHSSSSPPPPSAAPPAMEAEEKPPAPEENGEAELEPMRNGAGHTS
ETESSDSGATPGDKEGSTGAPPDLFQEDLPETNGKRQYNRDFLLGFQFLAACTQKPDGLP
QISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRGAAVSHAHQMMNMG
GGARRPPPRKIILNVSANDEVQLKKAENAWKPGMKRAGPSDDPEVITTQELFRKVRSILN
KLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGFSVAYGNMCRCLTTLKVPM
TDKPNTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSAQSSDQERLRLELEEAKDK
ARRRSIGNIRFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRLLTTIGKDLDFEK
AKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVSRRADQGPKTIEQIHKEAK
IEEQEEQRKVHQQLLSKDTKRRPEQQQREQQREQQREQRVQQREETWNTVPMTKNSRTID
PTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSELSRSGGGGASLNRYSALQST
PSQPTTPPAQNPEYDTRRTLGSRSSAGKERSEKLLSSAPMRPGSFVRGVSAKELLASPAL
SPEEPRRELESIRRLSVSEDKTEPECSRAREPVKAEPVVAQSPDRPALSEEEMERKSKAI
IDEFLHINDYKEAVQCVNELDLSSQLHVFVRVGVESTLERSQITRDHMGQLLFQLVQQGT
LPKPQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRDGGFSMRELFSELSKPLLPV
GRAGVLFSEILHILCKQMSHRKVGTLWRKAGLSWSDFLPEEEDIQDFISQQKLQFTVVDC
SSPEAALSATELSPEVLNRQLERLLLEDMASDEQIFDWVEANLDESQMSSSPFLRALMTA
VCKAAVKDESTSCRVDVAIIQRRLPVLLKYLNSDTERQLQALYALQGLIVTLDQPPNLLR
MFFDCLYDEDVISEDAFYKWETSKDPAEQLGKGVALKSVTAFFTWLREAEEESEDN
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccggcgaaaatagtcccaaaacctgccactgtcgcagtaagtggacctgga
actggcccgtctccgtcgagccaactgcgggctaccctgacctcggtgtctttaccgtcg
ggagccccaggcgctcctcaactgaacaccttgccgcctcctcaaattttccttaatatg
acgcgtcccaggttctctcgggttcagccatccctggatgaccgcatcttccccacacag
cccggtgtcgctgccgtctacagcgtaccgaggcaccctggtcctccctacacagctcac
gactacacaaagggacaccctaacttggcgggcacgccgccaggacatgcccactcgcag
gcgctctctcaggtatcattacccacagcttccccatatcgctaccctaagggctgggag
gcaggtggagtgtctccatacaccactggacagaattctggctcagcacctctagtgtac
tctcctcagacacagcaaatgaacacgcaaccgcagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatgtggaaccaccagttcgcgacgggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagca
cggccaaccatccccaccaacgctccctctatgcggccctgctctcagaaccccacatcg
gcggtgtacccccccaaccagcccaccatgatgatgatggcccccatgcctttcccctcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagcagttttcagtgcagccgccggggtctggcaccttctatcctggccctggccca
ggggagtaccctgctcagtatgctcctggacctcaatactatccaggacagcaggtgtac
cccccctcaccctccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aagaaaccatcctcccagatccgtatccgggaccccaaccagggcggcagggacatcaca
gaggagatcatggcagggggcacagggagccgaaatccaaccccccctgtcggacggccc
tcctccacccccacccctccgcaacagcagccgggcggtagccagactccggagcaaagc
cagggccaggccaactcagcctacagcctggagctcccccagcagccacagcagcagctc
acgcctggggctgcagccagcaagccagggccagtagatgataagccaaaattggagctg
cttgtccagaagtcttcctctcccgggcttggtcaatcagaaccttcattggaaaggcga
gaggccagtgcatctgtaactgctccctctccccacttggatccagaacttccctcccca
gccccagtggtggtttcccccatcctggcccctcttcctgttgccggccctattgagcag
ccctctgccgtggagcccactgctccccctccctctgcagcggaccccaagcacctgcca
ctcacaactcagtcccagacctcaaacacagaagaacttcttccagaagccccacgcacc
ctggctgcttccccagccctaacccctaaggctttgaatggccatgctgacactggggct
gagatggacacccagtctcaggagcactacccccttgctccctcactatccccaacccag
ccccaggcttcagccccggcttctagagaagactgcagtgaggctgtgcccagtgaggtg
agggcagagatgccccctgctgtcatggatcctatcgcaccaatcactgtgatgccagtc
actctgacctccagccctgcgcctgctgttccagcgcctccccctggccttccgccgcta
gtgcaggccacagcagagaccagcaagctctctgacactaaagacatccctctcaaagca
gggaccgagagactcatcacaccaaacagcaagcttgaaccacagctacaagcccttttc
agaaagagtcccactacagtatgtcagactgttcctgctacaccaaaaacctggaagaaa
ccaaatgaagggagtcctgttggagatgcatcacagagggagactgaggatgagctcaag
cctgtggaggaggctgctggagaccaggccctgcagcccgccaggccccatagtagcagc
agcccgcccccaccctcagcagcgcctccagccatggaggcagaggagaagccccctgcc
ccagaggaaaatggagaggctgagctggagcccatgaggaacggggctgggcacacctcg
gagacagagagcagtgacagtggggccacccctggggacaaggagggctctacaggagca
cccccagacctcttccaggaagatctgccggagaccaacgggaagcgccagtacaaccgg
gacttcctgctgggcttccagttcttggctgcctgtacacagaagccagacgggctacct
cagatcagtgacgtagttctggacaagataaaccaaaacaagctgccaacccgggcggtg
gaatccagggtgatctctcgtggccctgacttcacacctgccttcgctgactttggcagg
cagatgagtggaggacgcggcgctgcagtgagtcacgctcaccagatgatgaacatggga
gggggtgcccggcggcccccacccaggaagattatcctgaacgtgtcagcgaacgacgag
gtgcagctgaagaaggccgagaacgcctggaaacctggcatgaagagggcggggccatca
gacgaccctgaggtcattacaacacaggagctcttccggaaggtgcgcagcatcctcaac
aaactgacgcctcagatgttcaaccagctgatgaagcaagtgacggaccttaccatcgac
acggaggagcgcctcaagggcgtcatcgacctggtctttgagaaggccatcgacgagcct
ggcttctctgtggcctacgggaacatgtgccgctgcctcaccacgctcaaagtgcccatg
acagacaaacccaacaccacagtgaacttccgtaagcttctgctcaaccgctgtcagaag
gagtttgagcgggacaaggtggacgacgtggtgtttgagaggaaacagaaggagctcgac
tctgcacagtccagtgatcaagagagactacggttggagctggaggaggccaaggacaag
gcccgccggcgctccataggaaatatcaggttcatcggggagctgttcaaactcaagatg
ctgacagaggccatcatgcacgactgtgtggtcaagctgctgaagaaccatgacgaggaa
tcgctggagtgcctctgcaggctgctcaccaccattggcaaagacctggactttgagaag
gccaagcctcgcatggatcagtatttcaatcagatggagaaaattgtcaaggagcggaag
acatcgtctcggatacggtttatgctgcaagacgtgatagatctccgattgcacaactgg
gtgtccaggagagccgaccagggacccaagaccatcgagcagatccacaaagaggccaag
atcgaagagcaggaggagcagaggaaggtgcaccagcagctgctctccaaggacaccaag
agaaggccagagcagcagcagagagagcagcagagagaacagcagagggagcagcgtgtg
cagcagagagaggagacctggaacactgtgcccatgaccaagaacagcaggaccattgac
cccaccaagatccccaagatctccaagcctcaaatggatgagaagatccaactgggacca
cgggcctcactcaactggatgaagggcagtagtggaggggccaaagccagtgactctgaa
ttatcccggtctggtggtggtggcgccagtttaaaccggtattctgcactccagtccacc
ccatctcaacccaccaccccacctgcacaaaacccagagtatgacactagaagaaccttg
ggcagtcgaagcagtgcagggaaagagcgaagcgagaagctcttgagctcagccccgatg
cggcctggttccttcgttcgaggcgtcagtgccaaagagctgctggcgagcccggccctg
agtcccgaggagccccgcagagagctggagagcatcaggaggctcagcgtcagcgaggac
aagactgagccagagtgcagcagagccagggagcctgtgaaagcagagcctgtggttgcc
cagtctccagacagacctgccctctctgaggaggagatggagaggaagtccaaagctatc
attgacgagttcttgcacatcaacgactataaggaggctgtgcagtgtgtgaacgagctg
gacctgtcctctcagctccacgtgtttgttcgtgtgggggtggagtccaccctggagcgc
agtcagatcacacgggaccacatgggccagctcctcttccagttagtgcagcagggcacc
ctgcccaagccccagttcttcaaagggtttgctgacacccttgaactggcggacgacatg
gccattgacattccccatatctggctgtatctggcagagctgctcagccctgtgctgaga
gacgggggcttctctatgagagagctctttagtgaattaagcaaacctttacttcctgtt
ggaagagctggggtcttattttctgaaatactgcacatactatgcaaacaaatgagccat
aggaaagtaggcaccttgtggagaaaggcaggcctcagctggagtgacttcctgccagag
gaagaggacatccaggatttcatctcgcagcagaagctccagttcacagtggtggactgc
tctagccctgaggcagccctgtctgcgacagaattgtcccccgaggtgctcaaccggcag
ctggagagactcctgctggaggacatggccagtgatgagcagatctttgactgggtagag
gcaaatctagatgaatctcagatgagctcgtctccgttcctgagagctctgatgactgct
gtgtgtaaggcagcggtgaaagatgaaagcacttcctgtcgagtggacgtagccatcata
cagaggagattgcccgtattactcaagtaccttaactcagacactgagcgacagcttcaa
gcactttatgcacttcaggggctgatagtcacactggatcagcctcctaacctgctccgg
atgttctttgactgtctgtatgacgaggacgtcatctcggaggacgctttttacaagtgg
gagaccagcaaggaccccgcggagcagctgggcaaaggtgtggctctcaagtctgtaacc
gctttcttcacctggctgagggaggccgaggaagagtcggaggataattga
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integrated database retrieval system
