Oncorhynchus tshawytscha (Chinook salmon): 112218599
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Entry
112218599 CDS
T05605
Name
(RefSeq) semaphorin-4B
KO
K06521
semaphorin 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otw04090
]
112218599
CD molecules [BR:
otw04090
]
Proteins
112218599
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Sema4F_C
Paramecium_SA
Motif
Other DBs
NCBI-GeneID:
112218599
NCBI-ProteinID:
XP_024235284
UniProt:
A0AAZ3RKE0
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Position
LG19:29429419..29525063
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AA seq
849 aa
AA seq
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MSWLAVVRRGAMWTISMAQLCLPAFLLLLAYAFVQAAATEDDVTPRLSFTYNANERSTKR
FSVDGVFNYTSLLLSKEDNMLYVGAREELFALNLSDISRVKLQRNLTWSTHERKRDECSF
KGKDLQTDCFNYIKILLRVNSTHLYVCGTYAFSPICAYINTADFTLVRSQTGEIVTEDGR
GRCPFNPEYKSTAIMADGELYAGTVSNFQGNEPIIYKSLGQGAALKTENSLNWLQDPAFV
GSAYIQESLPKGNPVGDDDKIYFFFSEAGKEFEFFDNTIVSRIARVCKGDKGGERVLQKK
WTTFLKAQLLCSLPDDGFPFNIIQDMFVLTPSPEDWKNTVFYGVFTSQWYKGASGSSAVC
AFTMDQVERAFSGRYREVNRETQQWYTYNHPILDPRPGACITNAARDQGISSSLHMPDKV
LNFVKDHFLMDSVIRSQPLLLKRSVRYTQIAVHRVQAINKHYNVLFIGTDDGRLHKAINV
NNKMHIIEEMMLFTDPQPVQHIELDSEKGLLFVSSYSGLVEVPVANCSNYQSCGECVLSR
DPYCAWEGRQCLNVRLGGLENHWQQDVDEADTSVICNKTQPSPRFAKPPPTRMSSCQVIM
IPANMFKVLPCKLRSNLAERKWEYSEGAGHFLYPSPEGGLVVVAQADRQETYECWSVEEG
FRQLLANYCVRGEARQESTTLIGRSRTPLVPQEEPIILPGETRSPQINTKTYWNELIIVC
ALLGFSLVVFSLFAVYRNHDRMKSMLKEGECPNMQQKKPRLVGNPAENLPLNGNSTVPAS
VSDHKGYQTLNDNYICNTPPHECSSPDNSKSFSESEKRPLNLKESTVEISPICPRPRVRL
GSEIKDSIV
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagttggctggcagtcgtgaggagaggagctatgtggacaataagcatggcccagctc
tgtctcccggcattccttctcctactggcctacgcctttgtccaagcagctgccaccgag
gacgatgtcactccacgactcagcttcacttacaatgcaaatgagaggtcaaccaagaga
ttctctgtggatggggtcttcaattatacctctctgctcctcagtaaggaagataacatg
ctctatgttggagcacgagaggagctcttcgccctcaacctctctgatatcagcagagtc
aagctacaacgtaatctgacatggagcactcatgagaggaagagagatgagtgcagtttc
aagggcaaagacctacagactgattgcttcaattacatcaagattttactgcgtgtgaac
agtacccatctatacgtgtgtggaacctacgccttcagtccaatctgtgcgtacataaac
acagctgacttcactctggtgaggagccagactggggagatagtgacagaggatggacgc
ggccgctgccctttcaaccctgagtacaagtccactgccatcatggctgatggagagctg
tatgctgggacggtcagtaatttccaaggaaatgaacctattatttacaagagcctgggc
caaggcgctgccctaaaaacagaaaactccttgaactggcttcaggacccagcctttgtg
ggctctgcctacattcaggagagcctgcccaaaggcaacccggtgggcgacgacgataag
atttacttcttcttcagcgaagcgggaaaggagtttgaattctttgacaacaccattgta
tcgcgcatcgctcgcgtgtgtaagggtgacaaaggaggagagagggtgctgcagaagaaa
tggaccaccttccttaaagcccagctcctgtgttcactgcctgatgatggcttccccttc
aacatcatccaggacatgtttgtgttgacacccagcccagaagactggaagaacactgtg
ttctacggggtctttacttcacagtggtataaaggggcctctggcagctcagcagtgtgt
gccttcaccatggaccaggtggagagggccttcagcggccgttaccgtgaggtcaaccgg
gagacccagcagtggtacacctacaaccaccctatccttgatccacggcctggagcgtgc
atcactaatgcagcccgggaccagggcatctcctcctctctgcatatgcctgacaaggta
ctaaacttcgtcaaggaccacttcctgatggacagtgtgatccgcagccagcccctcctg
ctgaaacgcagcgtccgctacacccagatagctgtccaccgggtccaggccatcaacaaa
cactacaatgtgctcttcattggaacagatgatggaagactccacaaagccatcaatgtc
aacaacaagatgcacatcattgaagagatgatgcttttcactgacccccagcctgtacag
cacattgaactggactctgaaaagggcctgctgtttgtgtcctcctactctggcctggtg
gaggtcccggtggctaactgctccaactaccagagctgtggagagtgtgtcctgtccaga
gacccttactgtgcctgggaagggcggcagtgtctgaatgtcaggctgggtggactagaa
aaccactggcagcaggacgtggacgaggcagacacatccgttatctgcaacaagacacag
cccagccctcgctttgctaaacccccacccacacggatgtcttcatgccaggtgataatg
atcccagccaacatgttcaaagtgctgccctgtaagctgcgctccaacctggctgagagg
aagtgggagtacagtgagggtgcaggtcacttcctgtaccccagtcctgagggaggtcta
gtggtggtggcccaggctgacagacaggagacctatgagtgctggtcagtggaggagggc
ttcaggcaactcctggccaactactgtgttaggggagaggccaggcaggagagcaccacc
ctcattggccgctcacgcacccctctggtcccacaggaggagccaatcatcctacctgga
gagacccgctccccacagatcaacaccaagacctactggaacgagctcattatagtgtgt
gccctgctgggcttctccctggtggtcttctccctatttgcggtctacaggaaccacgac
cgcatgaagtccatgctgaaggaaggcgagtgccccaacatgcagcagaagaaacccagg
ctagtggggaatccggcagagaacttgcctctgaatggcaacagcacagtgccagcctct
gtgtcagaccacaagggttaccagaccctcaatgacaactacatctgcaacacaccgcca
catgagtgctcatcaccagacaacagcaagagcttctccgagtcagaaaagaggcctctg
aacttgaaggagagcactgtagagatctcgcccatctgcccgcggcctcgggtgagactg
ggctcagagatcaaagattccattgtgtga
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